Factsheet for TraesCS2A01G175100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G201500.1	Wheat	plasma membrane	92.49	91.29
TraesCS2D01G182500.1	Wheat	golgi	90.95	90.55
HORVU2Hr1G033070.14	Barley	mitochondrion	82.56	79.57
EER97506	Sorghum	extracellular, plasma membrane	73.73	72.93
Os07t0604300-01	Rice	extracellular	70.64	71.75
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	69.54	68.48
KRH72178	Soybean	mitochondrion	55.19	67.75
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	67.77	67.32
Solyc02g089120.2.1	Tomato	extracellular	66.23	67.11
VIT_14s0083g01160.t01	Wine grape	vacuole	64.46	66.97
PGSC0003DMT400003470	Potato	extracellular	65.78	66.67
TraesCS4A01G231200.1	Wheat	extracellular	67.11	66.09
TraesCS6A01G379800.1	Wheat	extracellular	64.9	65.77
Solyc02g065770.2.1	Tomato	extracellular	64.24	65.54
TraesCS3A01G409900.1	Wheat	plastid	39.96	65.34
KRH54735	Soybean	endoplasmic reticulum	65.34	64.91
KRH01360	Soybean	extracellular, golgi, plasma membrane	64.02	64.73
KRH45084	Soybean	extracellular, golgi, plasma membrane	64.02	64.73
KRH03165	Soybean	extracellular	64.68	64.54
Bra025406.1-P	Field mustard	extracellular	62.03	64.45
CDX86358	Canola	extracellular	62.03	64.45
PGSC0003DMT400068328	Potato	extracellular	62.91	64.19
KRH63181	Soybean	endoplasmic reticulum	64.24	63.82
CDX85277	Canola	extracellular	61.37	63.76
CDY70289	Canola	extracellular	54.53	62.22
TraesCS5A01G392000.1	Wheat	endoplasmic reticulum, extracellular, golgi	62.69	62.14
KRH18352	Soybean	plasma membrane	62.47	61.79
KRG93684	Soybean	extracellular, vacuole	61.59	61.45
Bra040587.1-P	Field mustard	extracellular	59.38	61.28
AT3G29810.1	Thale cress	extracellular	59.6	61.22
AT3G02210.1	Thale cress	extracellular	60.71	60.84
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	60.71	60.31
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	60.49	60.22
CDX87193	Canola	plasma membrane	60.49	60.09
CDY16831	Canola	plasma membrane	60.71	60.04
CDY43250	Canola	plasma membrane	60.49	59.96
CDY02184	Canola	plasma membrane	60.49	59.96
Bra012996.1-P	Field mustard	plasma membrane	60.26	59.74
CDY60470	Canola	plasma membrane	60.26	59.61
CDY58691	Canola	plasma membrane	60.04	59.39
Bra035951.1-P	Field mustard	plasma membrane	60.04	59.39
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	15.67	57.72
CDY24004	Canola	cytosol, nucleus, plastid	10.82	57.65
CDY42842	Canola	cytosol	15.45	57.38
TraesCS5A01G095200.1	Wheat	extracellular	55.85	56.35
TraesCS2A01G175000.1	Wheat	plasma membrane	53.64	54.12
CDY29033	Canola	cytosol	20.75	51.65
KRH56778	Soybean	extracellular	23.4	50.72
TraesCS2A01G388600.1	Wheat	extracellular, plasma membrane	39.96	48.53
TraesCS6A01G158000.1	Wheat	endoplasmic reticulum	34.66	45.11
TraesCS6A01G330900.1	Wheat	extracellular, plasma membrane	40.62	44.23
CDY14723	Canola	cytosol	25.39	36.16
TraesCS7A01G136600.1	Wheat	mitochondrion	27.15	18.25
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	26.27	17.68
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	24.28	15.9

Protein Annotations

EnsemblPlants:TraesCS2A01G175100.1	EnsemblPlantsGene:TraesCS2A01G175100	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31673	PANTHER:PTHR31673:SF7	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	SEG:seg
SignalP:SignalP-noTM	MapMan:21.1.2.2	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:133674814..133678085

Molecular Weight (calculated)

50170.5 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.225

Length

453 amino acids

Sequence
(BLAST)

001: MAAAAAPRPL RTSIALLLLA LALSALVPSS DAYDSLDPVG NITIKWDVKK WTEDGYEATV SLYNYQQYRH IQAPGWKLGW AWAGKEMIWT MAGAQTTEQG
101: DCSNFKVEPP PHCCRTDPEV VDFLPGAPYS QQTPNCCKGG VLSSWGQDPA NAIATFDVRV GRAGTTNSSV QVPANFTLKA PGPGYTCGPA KEVDPTKFIV
201: GDGRRTTQAL KTWNVTCTYS QFVAGRSPTC CVALSSFYNS TIVDCNTCSC GCQDNNTNPV SCVKPNSPYL ASVVPGDSTN IPAPLVKCSS HMCPIRVQWH
301: VKANYKDYWR VKITATNLNY LMNYSHWNLV AQHPNFNNLT TIFSFRYKDL NPYGTINDTG MMWGIKYYND LLMTAEHNGN VQSELLFRKD PDTFTFQKGW
401: AFPRRVYFNG ENCVMPPPDA YPWLPNASHR LSASLTIPFI TVWTALAFLL VHA

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.