Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 8
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16831 Canola plasma membrane 99.34 99.34
CDX87193 Canola plasma membrane 98.25 98.68
Bra012996.1-P Field mustard plasma membrane 93.67 93.87
AT5G60920.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 91.92 92.32
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 24.02 89.43
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 75.11 75.44
PGSC0003DMT400003470 Potato extracellular 72.71 74.5
Solyc02g065770.2.1 Tomato extracellular 72.05 74.32
PGSC0003DMT400068328 Potato extracellular 71.83 74.1
Solyc02g089120.2.1 Tomato extracellular 72.27 74.05
KRH54735 Soybean endoplasmic reticulum 73.14 73.46
Zm00001d031479_P001 Maize cytosol, mitochondrion 26.2 73.17
KRH63181 Soybean endoplasmic reticulum 72.71 73.03
KRH03165 Soybean extracellular 72.05 72.69
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 72.27 72.43
Bra025406.1-P Field mustard extracellular 68.78 72.25
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 72.05 72.05
Os03t0754500-00 Rice extracellular 32.31 69.16
Zm00001d013256_P001 Maize extracellular 67.47 68.82
Os07t0604300-01 Rice extracellular 66.81 68.61
EER90860 Sorghum extracellular, golgi, plasma membrane 67.25 68.6
Bra040587.1-P Field mustard extracellular 65.72 68.56
Os05t0386800-01 Rice extracellular 68.34 68.49
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 67.03 67.92
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 67.47 67.91
GSMUA_Achr2P06240_001 Banana mitochondrion 69.87 67.09
EER97506 Sorghum extracellular, plasma membrane 65.94 65.94
EER90859 Sorghum extracellular 61.14 65.88
TraesCS6D01G364400.1 Wheat extracellular 64.19 65.77
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 65.07 65.21
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 65.07 65.21
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 65.07 65.21
TraesCS6A01G379800.1 Wheat extracellular 63.54 65.1
TraesCS6B01G418400.1 Wheat extracellular 63.32 64.88
HORVU5Hr1G095910.12 Barley extracellular, vacuole 63.97 63.7
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 60.26 63.59
OQU92393 Sorghum extracellular 63.97 63.56
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 63.54 63.26
Bra008684.1-P Field mustard extracellular 53.06 62.79
Os03t0416300-01 Rice extracellular 62.66 62.66
TraesCS4A01G231200.1 Wheat extracellular 61.57 61.3
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 27.51 61.16
Bra035948.1-P Field mustard cytosol 12.88 60.82
TraesCS4D01G082700.1 Wheat extracellular 61.14 60.74
HORVU4Hr1G014530.1 Barley extracellular 61.35 60.69
TraesCS4B01G084800.1 Wheat extracellular 60.04 60.44
TraesCS2A01G175100.1 Wheat extracellular 59.39 60.04
TraesCS2D01G182500.1 Wheat golgi 59.39 59.78
TraesCS3A01G409900.1 Wheat plastid 35.81 59.21
KRH56778 Soybean extracellular 26.86 58.85
HORVU2Hr1G033070.14 Barley mitochondrion 59.39 57.87
TraesCS2B01G201500.1 Wheat plasma membrane 57.86 57.73
Os10t0497700-01 Rice extracellular 53.28 57.41
TraesCS5D01G402000.1 Wheat extracellular 27.95 56.14
TraesCS5B01G397000.2 Wheat extracellular 27.51 55.51
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 50.44 55.26
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 56.55 54.87
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 33.19 54.48
TraesCS3D01G404800.2 Wheat plasma membrane 52.18 52.3
Bra030800.1-P Field mustard cytosol 45.2 49.64
Bra019992.1-P Field mustard cytosol 42.14 48.61
Bra035768.1-P Field mustard mitochondrion, peroxisome, plastid 18.12 21.84
Bra020151.1-P Field mustard cytosol 10.48 18.53
Bra036147.1-P Field mustard plasma membrane 25.98 17.98
Bra033528.1-P Field mustard plasma membrane 25.55 17.75
Bra026378.1-P Field mustard extracellular, golgi, vacuole 25.11 17.61
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.11 17.24
Bra023941.1-P Field mustard plasma membrane 25.11 17.11
Bra001795.1-P Field mustard endoplasmic reticulum, vacuole 24.89 17.07
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 24.24 16.74
Protein Annotations
MapMan:21.1.2.2EnsemblPlantsGene:Bra035951EnsemblPlants:Bra035951.1EnsemblPlants:Bra035951.1-PInterPro:COBRA_plnGO:GO:0005575
GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016049GO:GO:0031225GO:GO:0040007UniProt:M4F4F1PFAM:PD140986PFAM:PF04833
PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0002541FB2
SEG:seg:::::
Description
AT5G60920 (E=6e-246) COB | COB (COBRA)
Coordinates
chrA09:-:2784235..2786629
Molecular Weight (calculated)
51267.4 Da
IEP (calculated)
8.634
GRAVY (calculated)
-0.134
Length
458 amino acids
Sequence
(BLAST)
001: MESSVSRSTS VVSKMSFLAV LVVFLISSSY ITSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIPSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVLNSWVQ DPGNAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPCPGSTF GPAKVVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNKT ESGACLDPDT PHLASVVSPP TKKGTILPPL VQCTRHLCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYS QWNMVAQHPN FDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQATFS
401: FEKGWAFPRR IYFNGDNCVM PPPDTYPFLP NGGFRPEVSV FASVLLPVLL VFFFFFSA
Best Arabidopsis Sequence Match ( AT5G60920.1 )
(BLAST)
001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
Arabidopsis Description
COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.