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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • plastid 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 92.79 93.0
VIT_14s0083g01160.t01 Wine grape vacuole 79.04 83.03
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 78.6 78.95
PGSC0003DMT400003470 Potato extracellular 76.2 78.08
Solyc02g089120.2.1 Tomato extracellular 76.2 78.08
Solyc02g065770.2.1 Tomato extracellular 75.55 77.93
Zm00001d031479_P001 Maize cytosol, mitochondrion 27.73 77.44
PGSC0003DMT400068328 Potato extracellular 74.89 77.25
GSMUA_Achr2P06240_001 Banana mitochondrion 80.35 77.15
KRH72178 Soybean mitochondrion 61.79 76.69
KRH01360 Soybean extracellular, golgi, plasma membrane 74.67 76.34
AT5G60920.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 75.11 75.44
Zm00001d013256_P001 Maize extracellular 73.8 75.28
KRH45084 Soybean extracellular, golgi, plasma membrane 73.58 75.22
EER90860 Sorghum extracellular, golgi, plasma membrane 73.58 75.06
Os05t0386800-01 Rice extracellular 74.45 74.62
CDX86358 Canola extracellular 70.74 74.31
Bra025406.1-P Field mustard extracellular 70.74 74.31
KRH03165 Soybean extracellular 73.58 74.23
KRH63181 Soybean endoplasmic reticulum 73.8 74.12
KRH54735 Soybean endoplasmic reticulum 73.8 74.12
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 72.93 73.89
Os03t0754500-00 Rice extracellular 34.5 73.83
CDX85277 Canola extracellular 70.09 73.62
CDY02184 Canola plasma membrane 72.93 73.09
CDY58691 Canola plasma membrane 72.93 72.93
Bra012996.1-P Field mustard plasma membrane 72.71 72.87
CDX87193 Canola plasma membrane 72.49 72.81
CDY16831 Canola plasma membrane 72.71 72.71
TraesCS6D01G364400.1 Wheat extracellular 70.74 72.48
CDY70289 Canola extracellular 62.66 72.29
KRG93684 Soybean extracellular, vacuole 71.62 72.25
Bra035951.1-P Field mustard plasma membrane 72.05 72.05
TraesCS6A01G379800.1 Wheat extracellular 70.31 72.04
TraesCS6B01G418400.1 Wheat extracellular 70.09 71.81
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 70.96 71.12
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 70.96 71.12
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 70.74 70.9
EER90859 Sorghum extracellular 65.72 70.82
AT3G02210.1 Thale cress extracellular 69.65 70.58
AT3G29810.1 Thale cress extracellular 67.9 70.52
Bra040587.1-P Field mustard extracellular 67.47 70.39
KRH18352 Soybean plasma membrane 69.87 69.87
HORVU5Hr1G095910.12 Barley extracellular, vacuole 69.87 69.57
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 68.78 69.23
CDY60470 Canola plasma membrane 68.78 68.78
CDY43250 Canola plasma membrane 68.56 68.71
CDY42842 Canola cytosol 18.12 68.03
CDY24004 Canola cytosol, nucleus, plastid 12.45 67.06
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 17.69 65.85
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 63.32 64.88
GSMUA_Achr4P14440_001 Banana plasma membrane 63.54 63.54
Os10t0497700-01 Rice extracellular 58.08 62.59
KRH56778 Soybean extracellular 27.73 60.77
CDY29033 Canola cytosol 23.58 59.34
TraesCS5B01G397000.2 Wheat extracellular 28.38 57.27
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 34.5 56.63
TraesCS5D01G402000.1 Wheat extracellular 28.17 56.58
GSMUA_Achr4P27070_001 Banana cytosol 50.22 55.56
CDY14723 Canola cytosol 28.38 40.88
GSMUA_Achr8P10390_001 Banana cytosol 12.88 23.6
GSMUA_AchrUn_... Banana plasma membrane 28.17 19.34
GSMUA_Achr3P21560_001 Banana plasma membrane 27.07 18.9
GSMUA_Achr4P33540_001 Banana vacuole 27.07 18.65
GSMUA_Achr11P... Banana plasma membrane 26.42 17.9
Protein Annotations
MapMan:21.1.2.2InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
EnsemblPlantsGene:GSMUA_Achr1G24500_001EnsemblPlants:GSMUA_Achr1P24500_001EnsemblPlants:GSMUA_Achr1T24500_001UniProt:M0S2Q7PFAM:PD140986PFAM:PF04833
PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF7SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000296CEE6
SEG:seg:::::
Description
COBRA-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G24500_001]
Coordinates
chr1:-:18887506..18891456
Molecular Weight (calculated)
51057.1 Da
IEP (calculated)
8.459
GRAVY (calculated)
-0.113
Length
458 amino acids
Sequence
(BLAST)
001: MGTDLSSSTF AVTGSMGKLA TFALSFLFVL VLSSLIPSTE AYDSLDPNGN ITIKWDIMQW TPDGYVAVVT IFNFQQYRHI QAPGWILGWT WAKKEVIWSM
101: VGAQTTEQGD CSRFKGNTPH CCKKDPTVVD LLPGTPYNQQ IANCCKGGVI NSWVQDPANA ASSFQVSVGA AGTTNKTVRV PKNFTLRAPG PGYTCGIAKI
201: VKPTKFVTQD GRRTTQALMT WNVTCTYSQF LAQKTPTCCV SLSSFYNDTI VNCPTCTCGC QNNATQPGSC VEGDSPYLAS VINGPGKNSF TPLVQCTSHM
301: CPVRVHWHVK LNYKEYWRVK IAITNFNYRM NYTQWNLVIQ HPNLDNLTQL FSFNYKSLTP YGGINDTAML WGVKYYNDFL MEAGPYGNVQ SELLFRKDPS
401: TFTFEKGWAF PRRVYFNGDN CVMPPPDSYP WLPNAATRLT STMMMALFAA LAWLLIYV
Best Arabidopsis Sequence Match ( AT5G60920.1 )
(BLAST)
001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
Arabidopsis Description
COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.