Factsheet for Bra029346.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
plasma membrane 3
plastid 2
cytosol 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42842	Canola	cytosol	81.3	81.97
Bra012996.1-P	Field mustard	plasma membrane	90.24	24.29
Bra035951.1-P	Field mustard	plasma membrane	89.43	24.02
AT5G60920.1	Thale cress	endoplasmic reticulum, plasma membrane, plastid	86.99	23.46
TraesCS3A01G409900.1	Wheat	plastid	50.41	22.38
KRH63181	Soybean	endoplasmic reticulum	69.92	18.86
KRH54735	Soybean	endoplasmic reticulum	69.11	18.64
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	68.29	18.42
PGSC0003DMT400068328	Potato	extracellular	65.04	18.02
Solyc02g089120.2.1	Tomato	extracellular	65.04	17.9
Bra025406.1-P	Field mustard	extracellular	63.41	17.89
Solyc02g065770.2.1	Tomato	extracellular	64.23	17.79
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	65.85	17.69
PGSC0003DMT400003470	Potato	extracellular	64.23	17.67
KRH03165	Soybean	extracellular	65.04	17.62
Bra040587.1-P	Field mustard	extracellular	61.79	17.31
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	64.23	17.29
Os07t0604300-01	Rice	extracellular	60.98	16.82
Bra008684.1-P	Field mustard	extracellular	52.85	16.8
Zm00001d013256_P001	Maize	extracellular	60.98	16.7
EER97506	Sorghum	extracellular, plasma membrane	61.79	16.59
Zm00001d034049_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	60.98	16.59
OQU92393	Sorghum	extracellular	61.79	16.49
EER90860	Sorghum	extracellular, golgi, plasma membrane	60.16	16.48
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	60.98	16.3
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	60.16	16.26
GSMUA_Achr2P06240_001	Banana	mitochondrion	62.6	16.14
TraesCS5B01G396900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.54	15.75
TraesCS5A01G392000.1	Wheat	endoplasmic reticulum, extracellular, golgi	58.54	15.75
TraesCS5D01G401900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.54	15.75
TraesCS2A01G175100.1	Wheat	extracellular	57.72	15.67
TraesCS4A01G231200.1	Wheat	extracellular	58.54	15.65
TraesCS4D01G082700.1	Wheat	extracellular	58.54	15.62
Bra019992.1-P	Field mustard	cytosol	50.41	15.62
TraesCS2D01G182500.1	Wheat	golgi	57.72	15.6
Bra030800.1-P	Field mustard	cytosol	52.85	15.59
Os05t0386800-01	Rice	extracellular	57.72	15.54
EER90859	Sorghum	extracellular	53.66	15.53
TraesCS2B01G201500.1	Wheat	plasma membrane	57.72	15.47
TraesCS4B01G084800.1	Wheat	extracellular	56.91	15.38
HORVU4Hr1G014530.1	Barley	extracellular	57.72	15.33
HORVU5Hr1G095910.12	Barley	extracellular, vacuole	56.91	15.22
TraesCS3B01G443000.1	Wheat	cytosol, plasma membrane, vacuole	51.22	15.07
Os03t0416300-01	Rice	extracellular	56.1	15.07
TraesCS6A01G379800.1	Wheat	extracellular	54.47	14.99
TraesCS6B01G418400.1	Wheat	extracellular	54.47	14.99
HORVU2Hr1G033070.14	Barley	mitochondrion	56.91	14.89
TraesCS6D01G364400.1	Wheat	extracellular	53.66	14.77
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.03	14.75
TraesCS3D01G404800.2	Wheat	plasma membrane	49.59	13.35
HORVU5Hr1G067940.1	Barley	plasma membrane, plastid	51.22	13.35
Os10t0497700-01	Rice	extracellular	45.53	13.18
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	21.95	7.11
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	24.39	4.59
Bra033528.1-P	Field mustard	plasma membrane	23.58	4.4
Bra036147.1-P	Field mustard	plasma membrane	23.58	4.38
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	23.58	4.37
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.58	4.35
Bra023941.1-P	Field mustard	plasma membrane	22.76	4.17
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	21.95	4.04
HORVU5Hr1G096010.13	Barley	endoplasmic reticulum	5.69	2.51
TraesCS5B01G397000.2	Wheat	extracellular	3.25	1.76
TraesCS5D01G402000.1	Wheat	extracellular	3.25	1.75
Zm00001d031479_P001	Maize	cytosol, mitochondrion	1.63	1.22
KRH56778	Soybean	extracellular	1.63	0.96
Bra020151.1-P	Field mustard	cytosol	0.0	0.0
Os03t0754500-00	Rice	extracellular	0.0	0.0
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	0.0	0.0
Bra035948.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra029346.1	EnsemblPlants:Bra029346.1-P	EnsemblPlantsGene:Bra029346	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225
GO:GO:0040007	InterPro:COBRA_pln	PANTHER:PTHR31673	PANTHER:PTHR31673:SF3	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025457E6	UniProt:M4EKM9	MapMan:21.1.2.2	:	:	:

Description

AT5G60920 (E=9e-055) COB | COB (COBRA)

Coordinates

chrA02:-:25741823..25742280

Molecular Weight (calculated)

14137.9 Da

IEP (calculated)

4.950

GRAVY (calculated)

0.086

Length

123 amino acids

Sequence
(BLAST)

001: MVAQHPNLDN ITQIFSFNYK SLTPYAGLND TVMLWGVKFY NDFLSEAGPL VNVESEILFR KDQATFTFEK GWAFPRRIYF NGDNCVMSPP DTYPFLPNGG
101: FRQQFSVFPA VLLPVLLFFL FST

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.