Factsheet for Bra033528.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32210	Canola	plasma membrane	99.24	99.09
CDY34424	Canola	plasma membrane	98.63	98.63
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	86.8	86.54
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	68.89	68.07
KRH50776	Soybean	endoplasmic reticulum, vacuole	65.1	66.72
VIT_05s0077g01470.t01	Wine grape	plasma membrane	65.86	66.67
KRH02312	Soybean	endoplasmic reticulum, extracellular	65.1	66.61
PGSC0003DMT400065836	Potato	cytosol	47.34	66.52
Bra036147.1-P	Field mustard	plasma membrane	64.64	64.35
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	61.76	62.52
Solyc01g065530.2.1	Tomato	nucleus, plastid	61.15	62.19
Solyc09g075540.1.1	Tomato	plasma membrane	59.33	59.97
VIT_07s0005g01020.t01	Wine grape	plasma membrane	58.73	59.81
KRH37033	Soybean	extracellular	58.27	59.08
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	31.41	54.47
GSMUA_AchrUn_...	Banana	plasma membrane	53.26	52.62
Zm00001d028826_P001	Maize	plasma membrane	53.11	52.47
GSMUA_Achr11P...	Banana	plasma membrane	53.57	52.22
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	52.81	51.94
TraesCS4B01G187300.1	Wheat	golgi	52.05	51.42
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	52.05	51.12
TraesCS4D01G188600.1	Wheat	golgi	52.05	50.97
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	52.05	50.97
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	49.77	50.15
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	49.62	49.47
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	49.77	49.1
Bra023941.1-P	Field mustard	plasma membrane	48.86	47.92
TraesCS2B01G107700.1	Wheat	plasma membrane	47.34	47.34
GSMUA_Achr8P10390_001	Banana	cytosol	17.91	47.2
TraesCS2D01G092100.1	Wheat	plasma membrane	46.59	46.52
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	46.59	46.44
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	45.98	45.7
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	45.22	45.64
Os07t0690900-01	Rice	plasma membrane	46.74	45.63
HORVU2Hr1G015440.1	Barley	cytosol	37.48	44.83
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	46.74	44.51
Bra020151.1-P	Field mustard	cytosol	17.15	43.63
HORVU4Hr1G054770.1	Barley	plastid	52.05	43.42
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	18.82	28.57
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	19.42	28.13
Bra030800.1-P	Field mustard	cytosol	17.6	27.82
Bra040587.1-P	Field mustard	extracellular	18.21	27.33
Bra025406.1-P	Field mustard	extracellular	18.06	27.29
Bra012996.1-P	Field mustard	plasma membrane	18.66	26.91
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	8.19	26.21
Bra019992.1-P	Field mustard	cytosol	15.63	25.94
Bra035951.1-P	Field mustard	plasma membrane	17.75	25.55
Bra008684.1-P	Field mustard	extracellular	14.57	24.81
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	4.4	23.58
Bra035948.1-P	Field mustard	cytosol	3.19	21.65

Protein Annotations

MapMan:21.1.2.2	EnsemblPlantsGene:Bra033528	EnsemblPlants:Bra033528.1	EnsemblPlants:Bra033528.1-P	InterPro:COBRA_pln	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	GO:GO:0046658
UniProt:M4EXJ1	PFAM:PD140986	PFAM:PF04833	PANTHER:PTHR31052	PANTHER:PTHR31052:SF3	SignalP:SignalP-noTM
UniParc:UPI00025448BD	SEG:seg	:	:	:	:

Description

AT4G16120 (E=0.0) ATSEB1, COBL7, SEB1 | COBL7 (COBRA-LIKE 7)

Coordinates

chrA01:+:11324458..11326918

Molecular Weight (calculated)

72275.0 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.190

Length

659 amino acids

Sequence
(BLAST)

001: MDSAPNFILL PLLLLSLLLA SIPLTTSQSA ADTNSSSPSD SDLCNGVFVS YTYTKGSKIP PNDSSNQPYR FESVVTVLNN GRDELKSWHV FVKFSHREIL
101: VSASNAVLSD GSSLPLSVEN GTVFAGYPSS DLKSAIQTAG DVTQMQASVE LVGTQFGVAP PNVPLPKNIS LVTDGWKCPK ATQKGKNVLQ VCCMPDPEFN
201: NTEIIDNEFL PRQNGDLTIM YDVIRSYSSN YMAQVTMENH NPLGRLDNWK LSFDWMRDEF IDTMTGAYPS LVDSSDCIDG PQAKYYQALD FSNVLSCARR
301: PTIIDLPLTK YNDSVFGFKP YCCRNGTILP KSMDPSKSIS AFQMQVYKMP PDLNISALSP PQNWRITGSL NPDYKCGPPV RVSPSQFVDP SGLPSNKTAF
401: ASWQVVCNIT QQKDTSPRCC VSFSAYFNDS IIPCKTCACG CSSNRASRTC STTSPALLLP QQALLVPFEN RTELTLAWSY LKHRPVPNPM PCGDNCGVSI
501: NWHLATDYRG GWTARVTVFN WGETNFPDWF TAIQMKKAAP GFEKAYSFNA TALDINGENN TIFMEGLPGL NYLVAERDGD NPLKNPRVPG KQQSVISFTK
601: KLTPGINVPG GDGFPSKVFF NGEECSLPSI FPTSNGNKLR HISAILLALP VLALLILRV

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.