Factsheet for Zm00001d007208_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	84.86	83.96
Os07t0690900-01	Rice	plasma membrane	66.51	64.44
TraesCS2B01G107700.1	Wheat	plasma membrane	64.68	64.19
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	64.83	64.15
TraesCS2D01G092100.1	Wheat	plasma membrane	64.53	63.94
Zm00001d028826_P001	Maize	plasma membrane	65.14	63.87
HORVU2Hr1G015440.1	Barley	cytosol	50.92	60.44
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	63.76	60.26
GSMUA_Achr11P...	Banana	plasma membrane	55.96	54.14
GSMUA_AchrUn_...	Banana	plasma membrane	54.74	53.67
PGSC0003DMT400065836	Potato	cytosol	38.23	53.3
VIT_05s0077g01470.t01	Wine grape	plasma membrane	50.76	51.0
KRH50776	Soybean	endoplasmic reticulum, vacuole	49.69	50.54
KRH02312	Soybean	endoplasmic reticulum, extracellular	49.24	50.0
Bra033528.1-P	Field mustard	plasma membrane	50.15	49.77
CDY32210	Canola	plasma membrane	50.15	49.7
CDY34424	Canola	plasma membrane	50.0	49.62
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	49.54	49.02
KRH37033	Soybean	extracellular	48.62	48.92
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	47.86	48.08
AT3G16860.1	Thale cress	plasma membrane	47.55	47.63
Solyc01g065530.2.1	Tomato	nucleus, plastid	46.94	47.38
Solyc09g075540.1.1	Tomato	plasma membrane	46.94	47.09
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	47.4	46.62
GSMUA_Achr8P10390_001	Banana	cytosol	17.74	46.4
VIT_07s0005g01020.t01	Wine grape	plasma membrane	45.57	46.06
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	46.94	46.03
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	46.64	45.73
CDY49611	Canola	plasma membrane	45.87	45.32
Bra036147.1-P	Field mustard	plasma membrane	45.87	45.32
CDY00037	Canola	plasma membrane	45.72	45.17
AT5G49270.1	Thale cress	extracellular, plasma membrane, vacuole	45.26	44.65
Zm00001d021661_P001	Maize	mitochondrion	44.95	43.36
Zm00001d031479_P001	Maize	cytosol, mitochondrion	7.34	29.27
Zm00001d013256_P001	Maize	extracellular	19.42	28.29
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	19.27	28.19
Zm00001d047276_P001	Maize	plasma membrane	19.11	27.78
Zm00001d034049_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	18.96	27.43
Zm00001d002803_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	17.43	26.15
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	18.2	25.87

Protein Annotations

EntrezGene:100037801	MapMan:21.1.2.2	UniProt:A1DZD9	EMBL:BT066526	InterPro:COBRA_pln	EMBL:EF078703
GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016043
GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	ProteinID:ONM26329.1	PFAM:PD140986	PFAM:PF04833
PANTHER:PTHR31052	PANTHER:PTHR31052:SF10	SignalP:SignalP-noTM	UniParc:UPI0000EA2724	EnsemblPlantsGene:Zm00001d007208	EnsemblPlants:Zm00001d007208_P001
EnsemblPlants:Zm00001d007208_T001	SEG:seg	:	:	:	:

Description

COBRA-like protein 7

Coordinates

chr2:-:224757540..224759504

Molecular Weight (calculated)

70311.1 Da

IEP (calculated)

5.672

GRAVY (calculated)

0.031

Length

654 amino acids

Sequence
(BLAST)

001: MAMLPVVVRM AAMPFIFLVL LAHTASAQPD AGCNGILLTY TLQRRDKIRP HVAAPNSQPY SFSASATVVN AGTRPLRSWA LLLTFVHGEI LVSVDGAVLT
101: SGAALPYNTT AGDAAGRPTP TSFTGYPQTD LLTPIATAGD PAKTQATVSL VGTLFAGPEP YVPLPSFLSL ADPSYTCPPA TNATSSPTNL TTCCVFTAGG
201: DPTGGLVESG FLPRRTGDLV ITYDVLQSYD TTYLALVTLE NDALLGRLDA WQLSWRWEHG EFISSMRGAY PREVDTAECL YGPQGQYYKD LDFSKAVLNC
301: DRRPVVHDLP PSRANDTEIG RIDHCCRNGT ILPKSMDVAR SKSAFQMVVY KMPPDLNRTK LYPPTGFNVT GAASALNPEY ACDPPISVSP SEYPDPSGLT
401: SITVAVATWQ VVCNITTSPK KPPRCCVSFS SFYNESVVPC RTCACGCPSS APTCSTTAPA MLLPPQALLM PFDRRASEAL EWADQKHLGV PKPMPCGDFC
501: GVSVNWHVAT DFTGGWSARL TLFNWDGTDM PDWFTAIVMD KAYDGFEQAY SFNATGVGNS TIFVRGAQGL NFLLGERNMS GVDYPVPGKQ QSVFSFTKKK
601: TPGIDIIAGD GFPSKVFFNG DECAMPLRIP SQGTSVVVPM QLCLLVSAFM LLLL

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.