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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033528.1-P Field mustard plasma membrane 98.63 98.63
CDY32210 Canola plasma membrane 98.48 98.33
AT4G16120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 86.65 86.38
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 70.56 69.92
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 68.59 67.77
PGSC0003DMT400065836 Potato cytosol 47.65 66.95
VIT_05s0077g01470.t01 Wine grape plasma membrane 65.86 66.67
KRH02312 Soybean endoplasmic reticulum, extracellular 65.1 66.61
KRH50776 Soybean endoplasmic reticulum, vacuole 64.95 66.56
CDY49611 Canola plasma membrane 64.64 64.35
CDY00037 Canola plasma membrane 64.49 64.2
PGSC0003DMT400065840 Potato endoplasmic reticulum, extracellular, plasma membrane 62.37 63.13
Solyc01g065530.2.1 Tomato nucleus, plastid 61.76 62.81
Solyc09g075540.1.1 Tomato plasma membrane 59.48 60.12
VIT_07s0005g01020.t01 Wine grape plasma membrane 58.88 59.97
KRH37033 Soybean extracellular 58.42 59.23
GSMUA_AchrUn_... Banana plasma membrane 53.26 52.62
GSMUA_Achr11P... Banana plasma membrane 53.72 52.37
Zm00001d028826_P001 Maize plasma membrane 52.96 52.32
CDY19626 Canola mitochondrion 32.63 52.18
TraesCS4B01G187300.1 Wheat golgi 52.35 51.72
EER95000 Sorghum endoplasmic reticulum, extracellular, plasma membrane 52.5 51.64
TraesCS4D01G188600.1 Wheat golgi 52.35 51.26
Os03t0301200-01 Rice extracellular, plasma membrane, vacuole 52.05 51.12
TraesCS4A01G117100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.05 50.97
CDY57659 Canola cytosol 11.68 50.33
CDY36030 Canola vacuole 49.32 50.15
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 49.62 50.0
OQU90545 Sorghum extracellular, plasma membrane, vacuole 49.62 49.47
CDX82237 Canola endoplasmic reticulum, vacuole 49.92 49.25
GSMUA_Achr8P10390_001 Banana cytosol 17.91 47.2
TraesCS2B01G107700.1 Wheat plasma membrane 46.89 46.89
CDY29275 Canola extracellular, plasma membrane, vacuole 46.74 46.32
TraesCS2D01G092100.1 Wheat plasma membrane 46.28 46.21
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 46.28 46.14
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 46.43 46.02
CDX89278 Canola extracellular, golgi, vacuole 46.28 46.0
Os07t0690900-01 Rice plasma membrane 46.43 45.33
CDY09102 Canola cytosol 17.91 45.21
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 46.59 44.95
HORVU2Hr1G015440.1 Barley cytosol 37.03 44.28
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 46.43 44.22
HORVU4Hr1G054770.1 Barley plastid 52.2 43.54
CDY55591 Canola plasma membrane 49.47 39.18
CDY43072 Canola plasma membrane 49.32 38.46
CDX90983 Canola extracellular 18.82 28.51
CDY70289 Canola extracellular 17.0 28.21
CDY66895 Canola cytosol 2.43 28.07
CDX93481 Canola plasma membrane 18.51 27.79
CDX85277 Canola extracellular 18.36 27.75
CDX85543 Canola extracellular, plasma membrane, vacuole 18.97 27.41
CDX86358 Canola extracellular 18.06 27.29
CDY60470 Canola plasma membrane 18.97 27.29
CDY02184 Canola plasma membrane 18.82 27.13
CDY43250 Canola plasma membrane 18.66 26.91
CDY31063 Canola plasma membrane 17.6 26.73
CDY58691 Canola plasma membrane 18.51 26.64
CDX69511 Canola plasma membrane 18.36 26.59
CDY02181 Canola endoplasmic reticulum, extracellular 8.19 26.21
CDY16831 Canola plasma membrane 18.21 26.2
CDY20671 Canola extracellular, plasma membrane, vacuole 18.06 26.15
CDX87193 Canola plasma membrane 18.06 26.1
CDY26444 Canola plastid 14.42 25.96
CDY58695 Canola extracellular 8.04 25.73
CDY24004 Canola cytosol, nucleus, plastid 3.19 24.71
CDY42842 Canola cytosol 4.55 24.59
CDY29033 Canola cytosol 6.22 22.53
CDX94950 Canola nucleus 17.15 19.82
CDY26445 Canola cytosol 4.7 18.34
CDX87194 Canola mitochondrion 5.77 18.18
CDY14723 Canola cytosol 8.19 16.98
CDX70627 Canola cytosol, nucleus, plasma membrane 18.66 14.34
Protein Annotations
MapMan:21.1.2.2GO:A0A078HAB3UniProt:A0A078HAB3EnsemblPlants:CDY34424ProteinID:CDY34424ProteinID:CDY34424.1
InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00056496001PFAM:PD140986
PFAM:PF04833PANTHER:PTHR31052PANTHER:PTHR31052:SF3SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE6F9C
SEG:seg:::::
Description
BnaC01g22090DBnaC01g22090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAB3]
Coordinates
chrLK032334:-:2194..5211
Molecular Weight (calculated)
72268.0 Da
IEP (calculated)
7.159
GRAVY (calculated)
-0.194
Length
659 amino acids
Sequence
(BLAST)
001: MDSAPNFILL PLLLLSLLLA SIPLTASQSA ADTNSSSPSD SDLCNGVFVS YTYTKGSKIP PNDSSNQPYR FESVVTVLNN GRDELKSWRV FVKFSHREIL
101: VSASNAVLSD GSSLPLSVEN GTVFAGYPSS DLKSAIQTAG DVTQMQASVE LVGTQFGVAP PNVPLPKNIS LVTDGWKCPK ATQKGKNVMQ VCCMPDPDFN
201: NTEIIDNEFL PRQNGDLTIM YDVIRSYASN YMAQVTMENH NPLGRLDNWK LSFDWMRDEF IDTMTGAYPS LVDSSDCIDG PQAKYYQALD FSNVLSCARR
301: PTIIDLPLTK YNDSVFGFKP YCCRNGTILP KSMDPSKSIS AFQMQVYKMP PDLNISALSP PQNWRITGSL NPDYKCGPPV RVSPSQFVDP SGLPSNKTAF
401: ASWQVVCNIT QQKDTSPRCC VSFSAYFNDS IIPCKTCACG CSSNRASRTC STTSPALILP QQALLVPFDN RTELTLAWSY LKHRPVPNPM PCGDNCGVSI
501: NWHLATDYRG GWTARVTVFN WGETTFPDWF TAIQMKKAAP GFEKAYSFNA TALDINGENN TIFMEGLPGL NYLVAERDGD NPLKNPRVPG KQQSVISFTK
601: KLTPGINVPG GDGFPSKVFF NGEECSLPSI FPTSNGNKRR HISAILLALP VLALLILRV
Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.