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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60470 Canola plasma membrane 97.37 97.16
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 96.06 96.48
AT3G02210.1 Thale cress extracellular 89.28 90.27
CDX86358 Canola extracellular 72.87 76.38
CDX85277 Canola extracellular 71.99 75.46
KRH72178 Soybean mitochondrion 60.39 74.8
CDY70289 Canola extracellular 63.24 72.8
CDY66895 Canola cytosol 8.97 71.93
KRH01360 Soybean extracellular, golgi, plasma membrane 70.24 71.65
KRH45084 Soybean extracellular, golgi, plasma membrane 69.37 70.76
CDY24004 Canola cytosol, nucleus, plastid 13.13 70.59
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 70.02 70.02
KRG93684 Soybean extracellular, vacuole 69.15 69.6
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 68.71 68.56
KRH18352 Soybean plasma membrane 68.27 68.12
Zm00001d031479_P001 Maize cytosol, mitochondrion 24.29 67.68
CDY02184 Canola plasma membrane 67.61 67.61
Os07t0604300-01 Rice extracellular 65.86 67.49
CDY58691 Canola plasma membrane 67.18 67.03
CDX87193 Canola plasma membrane 66.74 66.89
EER97506 Sorghum extracellular, plasma membrane 66.96 66.81
CDY16831 Canola plasma membrane 66.96 66.81
GSMUA_Achr2P06240_001 Banana mitochondrion 69.37 66.46
Zm00001d013256_P001 Maize extracellular 64.55 65.7
EER90860 Sorghum extracellular, golgi, plasma membrane 64.55 65.7
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 65.86 65.43
Os05t0386800-01 Rice extracellular 64.99 64.99
TraesCS6D01G364400.1 Wheat extracellular 63.24 64.65
EER90859 Sorghum extracellular 59.74 64.24
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 63.24 63.94
OQU92393 Sorghum extracellular 64.33 63.77
TraesCS6B01G418400.1 Wheat extracellular 62.36 63.76
TraesCS6A01G379800.1 Wheat extracellular 62.14 63.53
Os03t0416300-01 Rice extracellular 63.46 63.32
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 62.8 62.8
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 62.8 62.8
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 62.8 62.8
CDX90983 Canola extracellular 59.74 62.76
Os03t0754500-00 Rice extracellular 29.1 62.15
HORVU5Hr1G095910.12 Barley extracellular, vacuole 62.14 61.74
TraesCS2A01G175100.1 Wheat extracellular 59.96 60.49
TraesCS4A01G231200.1 Wheat extracellular 60.61 60.22
CDX69511 Canola plasma membrane 59.74 60.0
CDY42842 Canola cytosol 15.97 59.84
TraesCS2D01G182500.1 Wheat golgi 59.52 59.78
CDX85543 Canola extracellular, plasma membrane, vacuole 59.52 59.65
TraesCS3A01G409900.1 Wheat plastid 36.1 59.57
CDY26444 Canola plastid 47.7 59.56
TraesCS4B01G084800.1 Wheat extracellular 59.08 59.34
CDY29033 Canola cytosol 23.63 59.34
TraesCS4D01G082700.1 Wheat extracellular 59.74 59.22
HORVU4Hr1G014530.1 Barley extracellular 59.96 59.18
TraesCS2B01G201500.1 Wheat plasma membrane 58.64 58.39
HORVU2Hr1G033070.14 Barley mitochondrion 59.74 58.09
Os10t0497700-01 Rice extracellular 52.74 56.71
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 51.2 55.98
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 56.24 54.45
TraesCS5D01G402000.1 Wheat extracellular 27.13 54.39
TraesCS5B01G397000.2 Wheat extracellular 26.7 53.74
TraesCS3D01G404800.2 Wheat plasma membrane 53.61 53.61
CDY02181 Canola endoplasmic reticulum, extracellular 24.07 53.4
CDY58695 Canola extracellular 23.41 51.94
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 31.29 51.25
CDY31063 Canola plasma membrane 47.26 49.77
CDX93481 Canola plasma membrane 47.48 49.43
CDY20671 Canola extracellular, plasma membrane, vacuole 47.48 47.69
CDY26445 Canola cytosol 17.07 46.15
CDY14723 Canola cytosol 28.01 40.25
CDX94950 Canola nucleus 43.98 35.26
CDX70627 Canola cytosol, nucleus, plasma membrane 60.39 32.17
CDX87194 Canola mitochondrion 11.38 24.88
CDY57659 Canola cytosol 7.44 22.22
CDY19626 Canola mitochondrion 18.16 20.15
CDY09102 Canola cytosol 11.38 19.92
CDY32210 Canola plasma membrane 27.13 18.79
CDY34424 Canola plasma membrane 26.91 18.66
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 26.7 18.35
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 26.48 18.14
CDY36030 Canola vacuole 25.16 17.75
CDX82237 Canola endoplasmic reticulum, vacuole 25.82 17.66
CDY49611 Canola plasma membrane 25.16 17.37
CDY00037 Canola plasma membrane 25.16 17.37
CDX89278 Canola extracellular, golgi, vacuole 23.85 16.44
CDY29275 Canola extracellular, plasma membrane, vacuole 23.85 16.39
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 23.85 16.39
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 23.85 15.96
CDY55591 Canola plasma membrane 26.7 14.66
CDY43072 Canola plasma membrane 26.48 14.32
Protein Annotations
MapMan:21.1.2.2GO:A0A078HXJ1UniProt:A0A078HXJ1EnsemblPlants:CDY43250ProteinID:CDY43250ProteinID:CDY43250.1
InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00076281001PFAM:PD140986
PFAM:PF04833PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-noTMUniParc:UPI0004EDF183
Description
BnaC05g48430DBnaC05g48430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXJ1]
Coordinates
chrLK032550:+:90669..92853
Molecular Weight (calculated)
50665.7 Da
IEP (calculated)
9.067
GRAVY (calculated)
-0.125
Length
457 amino acids
Sequence
(BLAST)
001: MGFLCSSSSS IVFKLGVSII FLVSFSGYTP ADAYDPLDPS GNITIKWDII TWTGDGYVAT VTLYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGTPYN QQVANCCRGG VINSWAQDPA TAVSSFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCGPG KIVKPSRFVG
201: TDKRRVTQAM MTWNVTCTYS QFLAQRTPTC CVSLSSFYNS TIVPCPTCSC GCRNTSQPGN CVDSKGPRIA SVVVPNTGKS LYVPPLVQCT NHMCPVRIHW
301: HVKVNYKAYW RVKVTITNFN YNMNYSQWNL VVQHPNFDNL TQTFSFNYKP LIPYASINDT GILWGVKFYN DLLMQAGPYG NVQSELLFQK EASAFTLEKG
401: WAFPRRIYFN GDNCVMPPPD SYPWLPNTAS HKPISSWFAA ILGSISLLLT AFSHGML
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.