Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001795.1-P | Field mustard | endoplasmic reticulum, vacuole | 98.46 | 95.51 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 97.99 | 95.06 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 89.35 | 86.16 |
| CDY19626 | Canola | mitochondrion | 53.7 | 84.47 |
| CDY57659 | Canola | cytosol | 17.13 | 72.55 |
| CDY55591 | Canola | plasma membrane | 92.44 | 72.0 |
| CDY43072 | Canola | plasma membrane | 91.36 | 70.06 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 69.29 | 67.52 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 68.83 | 67.07 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 68.06 | 66.52 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.44 | 65.89 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 61.11 | 60.55 |
| CDY09102 | Canola | cytosol | 23.92 | 59.39 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 59.72 | 59.08 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 55.86 | 58.86 |
| PGSC0003DMT400002678 | Potato | vacuole | 60.03 | 58.85 |
| KRH22248 | Soybean | golgi, vacuole | 58.02 | 56.46 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 56.79 | 56.1 |
| PGSC0003DMT400037398 | Potato | vacuole | 57.25 | 55.96 |
| KRH27088 | Soybean | mitochondrion | 57.87 | 55.89 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 57.1 | 55.64 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 57.56 | 55.59 |
| KXG36369 | Sorghum | mitochondrion | 55.4 | 53.34 |
| Zm00001d021661_P001 | Maize | mitochondrion | 55.25 | 52.8 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 54.48 | 52.37 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 54.17 | 52.23 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 54.17 | 52.08 |
| Os06t0685100-00 | Rice | plasma membrane | 54.48 | 51.68 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 53.7 | 51.63 |
| PGSC0003DMT400002688 | Potato | cytosol | 10.19 | 51.16 |
| CDY34424 | Canola | plasma membrane | 50.15 | 49.32 |
| CDY32210 | Canola | plasma membrane | 50.0 | 49.09 |
| CDY49611 | Canola | plasma membrane | 48.15 | 47.13 |
| CDY00037 | Canola | plasma membrane | 47.99 | 46.98 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 47.53 | 46.32 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.91 | 45.58 |
| CDY66895 | Canola | cytosol | 2.62 | 29.82 |
| CDX90983 | Canola | extracellular | 18.83 | 28.05 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 18.98 | 26.97 |
| CDY26444 | Canola | plastid | 15.12 | 26.78 |
| CDY70289 | Canola | extracellular | 16.36 | 26.7 |
| CDX85277 | Canola | extracellular | 17.9 | 26.61 |
| CDY58695 | Canola | extracellular | 8.33 | 26.21 |
| CDX69511 | Canola | plasma membrane | 18.36 | 26.15 |
| CDX86358 | Canola | extracellular | 17.59 | 26.15 |
| CDY31063 | Canola | plasma membrane | 17.28 | 25.81 |
| CDX93481 | Canola | plasma membrane | 17.44 | 25.74 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 8.18 | 25.73 |
| CDY02184 | Canola | plasma membrane | 18.06 | 25.6 |
| CDX87193 | Canola | plasma membrane | 17.9 | 25.44 |
| CDY16831 | Canola | plasma membrane | 17.9 | 25.33 |
| CDY58691 | Canola | plasma membrane | 17.9 | 25.33 |
| CDY43250 | Canola | plasma membrane | 17.75 | 25.16 |
| CDY60470 | Canola | plasma membrane | 17.59 | 24.89 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 17.13 | 24.4 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 2.93 | 22.35 |
| CDY26445 | Canola | cytosol | 5.4 | 20.71 |
| CDY42842 | Canola | cytosol | 3.86 | 20.49 |
| CDY29033 | Canola | cytosol | 5.71 | 20.33 |
| CDX94950 | Canola | nucleus | 16.51 | 18.77 |
| CDX87194 | Canola | mitochondrion | 6.02 | 18.66 |
| CDY14723 | Canola | cytosol | 8.18 | 16.67 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 18.83 | 14.22 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078HCD7 | UniProt:A0A078HCD7 | EnsemblPlants:CDY36030 | ProteinID:CDY36030 | ProteinID:CDY36030.1 |
| InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00059842001 | PFAM:PD140986 |
| PFAM:PF04833 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | SignalP:SignalP-noTM | UniParc:UPI0004EEE2F3 | SEG:seg |
Description
BnaC03g41680DBnaC03g41680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCD7]
Coordinates
chrLK032366:+:803..3502
Molecular Weight (calculated)
72361.7 Da
IEP (calculated)
8.805
GRAVY (calculated)
-0.407
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIPWDTRYS LSLLILLSSI LFLCNGQDYG TPTEDGAGEP PPEMARCNGI FMSYSFGSRE REYPHVKNVT AQSWAFKSTA MIVNAGKEEL TGWQMFIGFR
101: HKELIVSATG AVPMDGDFPL DASNGTTFVG SPNTDLKTSI LTAGDFTQIS TNIEITGTLF GVAKSVMPMP KTLKLINDGW ECPAAKRKGG NMNVCCKRNP
201: KFKVKTGPKT KFAPRRHGDL NIVYDVIQSF SSNYLAQVTI DNDNPLGRLD RWNLTWEWMR GEFINTMRGA YTHKRDPSEC LYSKAGQYYK DLDFSQVMNC
301: QKKPAISDLP PERKDDKVMG KLPFCCKNGT LLPPLMDPSK SRSMFQLQVW KLPPDLNRTA LYPPQHWKID GVLNPQYKCG PPVRVDPSQF PDSSGLPAVT
401: YAISSWQIVC NITKPKAQAS RCCVSFSAYY NNSAIPCNTC ACGCDDIDTN TCNADRNPLL LPADALLVPF DNRTLKAKAW AKQNHMPIPK KLPCPDNCGV
501: SINWHVNTDY RNGWTARLTV FNWRDFAFED WFVAVEMGKS GKGYENVYSF NGTRVPPNNR TVMFQGLPGL NYLVGQVNGT HPLRDPPVPG KQQSVISFTK
601: KNINDLKIAE GDGFPTKLFF NGEECALPKH FPKKSSGHRG VAFALMMD
101: HKELIVSATG AVPMDGDFPL DASNGTTFVG SPNTDLKTSI LTAGDFTQIS TNIEITGTLF GVAKSVMPMP KTLKLINDGW ECPAAKRKGG NMNVCCKRNP
201: KFKVKTGPKT KFAPRRHGDL NIVYDVIQSF SSNYLAQVTI DNDNPLGRLD RWNLTWEWMR GEFINTMRGA YTHKRDPSEC LYSKAGQYYK DLDFSQVMNC
301: QKKPAISDLP PERKDDKVMG KLPFCCKNGT LLPPLMDPSK SRSMFQLQVW KLPPDLNRTA LYPPQHWKID GVLNPQYKCG PPVRVDPSQF PDSSGLPAVT
401: YAISSWQIVC NITKPKAQAS RCCVSFSAYY NNSAIPCNTC ACGCDDIDTN TCNADRNPLL LPADALLVPF DNRTLKAKAW AKQNHMPIPK KLPCPDNCGV
501: SINWHVNTDY RNGWTARLTV FNWRDFAFED WFVAVEMGKS GKGYENVYSF NGTRVPPNNR TVMFQGLPGL NYLVGQVNGT HPLRDPPVPG KQQSVISFTK
601: KNINDLKIAE GDGFPTKLFF NGEECALPKH FPKKSSGHRG VAFALMMD
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.