Factsheet for Solyc10g006450.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037398	Potato	vacuole	95.23	96.38
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	65.28	71.22
VIT_10s0116g00620.t01	Wine grape	extracellular	57.38	58.87
CDY19626	Canola	mitochondrion	35.92	58.5
VIT_19s0177g00160.t01	Wine grape	plasma membrane	56.63	58.02
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	32.64	57.63
CDY36030	Canola	vacuole	55.59	57.56
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	56.93	56.85
Solyc02g080240.1.1	Tomato	extracellular	32.19	56.1
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	55.74	55.99
CDX82237	Canola	endoplasmic reticulum, vacuole	55.59	55.84
Bra023941.1-P	Field mustard	plasma membrane	55.44	55.36
GSMUA_Achr3P21560_001	Banana	plasma membrane	52.91	54.12
GSMUA_Achr4P33540_001	Banana	vacuole	53.5	53.98
AT4G27110.1	Thale cress	extracellular	53.06	53.29
CDX97377	Canola	endoplasmic reticulum, golgi, vacuole	52.76	53.23
CDY57659	Canola	cytosol	12.07	52.94
KRH22248	Soybean	golgi, vacuole	52.01	52.4
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	50.97	52.37
CDY29275	Canola	extracellular, plasma membrane, vacuole	51.71	52.18
CDX89278	Canola	extracellular, golgi, vacuole	51.42	52.04
CDY14283	Canola	endoplasmic reticulum, plasma membrane, vacuole	52.91	51.98
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	51.27	51.89
KRH27088	Soybean	mitochondrion	51.56	51.56
Zm00001d021661_P001	Maize	mitochondrion	51.71	51.18
Solyc01g065530.2.1	Tomato	nucleus, plastid	49.18	50.93
KXG36369	Sorghum	mitochondrion	50.82	50.67
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	50.67	50.6
TraesCS7A01G136600.1	Wheat	mitochondrion	50.52	50.3
TraesCS7D01G136500.1	Wheat	mitochondrion	50.37	50.15
TraesCS7B01G037700.1	Wheat	mitochondrion	50.22	50.0
Os06t0685100-00	Rice	plasma membrane	50.82	49.93
CDY09102	Canola	cytosol	18.78	48.28
Solyc02g080250.1.1	Tomato	cytosol	24.59	48.25
Solyc09g075540.1.1	Tomato	plasma membrane	46.8	48.16
Bra020151.1-P	Field mustard	cytosol	18.03	46.72
CDY55591	Canola	plasma membrane	55.44	44.71
CDY43072	Canola	plasma membrane	55.59	44.14
Solyc02g064790.1.1	Tomato	extracellular, vacuole	3.13	30.43
Solyc02g089130.2.1	Tomato	extracellular	18.93	29.26
Solyc03g070440.2.1	Tomato	extracellular	18.63	29.0
Solyc03g114890.2.1	Tomato	extracellular	17.29	28.93
Solyc02g065770.2.1	Tomato	extracellular	18.93	28.6
Solyc02g089120.2.1	Tomato	extracellular	18.63	27.96
Solyc03g114900.2.1	Tomato	extracellular	18.33	27.52
Solyc01g103860.2.1	Tomato	cytosol	16.99	26.95
Solyc03g114910.2.1	Tomato	extracellular, plasma membrane, vacuole	18.03	26.42
Solyc03g070460.1.1	Tomato	cytosol	4.47	25.86
Solyc01g111050.2.1	Tomato	cytosol	17.73	25.37
Solyc03g114880.1.1	Tomato	cytosol, extracellular, vacuole	10.73	22.57
Solyc03g070450.1.1	Tomato	extracellular, vacuole	5.96	18.6

Protein Annotations

EnsemblPlants:Solyc10g006450.2.1	EnsemblPlantsGene:Solyc10g006450.2	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	PFAM:PD140986	PFAM:PF04833	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI000276AB95	UniProt:K4CXH6	MapMan:21.1.2.2	:	:	:

Description

No Description!

Coordinates

chr10:-:1056386..1059210

Molecular Weight (calculated)

74627.1 Da

IEP (calculated)

8.775

GRAVY (calculated)

-0.314

Length

671 amino acids

Sequence
(BLAST)

001: MIVRSEGMKI PWMNLINCIV LVVFCYSIEV CNGQDYGGGD EAVKAAPPPA QENCDGVFVT YAFDNREREY PFVKNVTAQA WAFTSMLTVI NTGLFELKSW
101: KVQIGFQHNE VLISTEGAVA MGGDGFPVKT GKNGTVLAGF PQSDLKTAIE TAGDFTQMAA QVKIKGTQFG VPAKATPMPK SINLINDGYK CPAPKKFKTF
201: MQMCCKKDPK FKPKNTSIKF MERQNGDLSF TYDVLSAFEN KYQAQVTIDN ISPLGRLDRW NLTWEWMRNE FIYSMKGAYT HKKDPSECIY GPQGQYYKDF
301: DFSVVMNCQK KPVISDLPPE MENNDKLGKL PFCCKNGALL PTTMNGTKAR SIFQMEVFKL PPDMNRTALY PPQNWNIVGR VNPSYKCGPP IRVDPTGFPD
401: PNKIGITLNA VASWQITCNI TRPQPKQAKC CVSFSAFYTD SVVPCNTCAC GCEQPSKCDG NGKALPLPAQ ALLVPFQDRE KLAKEWNRIK HLGSMPKKLP
501: CPDNCGVSIN WHLESNYKTG WTARMTLFNW GNDAFVDWFT AVQMKKNIGD GYENVYSFNG TKLPQRSNTI FMQGLKGLTY LVGQVNGTNP NKDPKVPGKQ
601: QSVISFLKKN TPNANIEGGD GFPSKVIFNG EECALPPNIP KSHAAFKSQV GLLPAVLLAL LTFLLLTEQF H

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.