Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- mitochondrion 1
- vacuole 4
- extracellular 5
- endoplasmic reticulum 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 56.36 | 35.28 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 56.1 | 32.19 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 49.09 | 28.99 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 48.57 | 28.86 |
| Solyc03g070460.1.1 | Tomato | cytosol | 8.05 | 26.72 |
| Bra035948.1-P | Field mustard | cytosol | 5.97 | 23.71 |
| Solyc03g114890.2.1 | Tomato | extracellular | 14.03 | 13.47 |
| Solyc02g089130.2.1 | Tomato | extracellular | 14.55 | 12.9 |
| Solyc03g114910.2.1 | Tomato | extracellular, plasma membrane, vacuole | 15.32 | 12.88 |
| Solyc02g065770.2.1 | Tomato | extracellular | 14.55 | 12.61 |
| Solyc02g089120.2.1 | Tomato | extracellular | 14.29 | 12.3 |
| Solyc02g080250.1.1 | Tomato | cytosol | 10.91 | 12.28 |
| Solyc03g070440.2.1 | Tomato | extracellular | 13.25 | 11.83 |
| Solyc01g103860.2.1 | Tomato | cytosol | 12.73 | 11.58 |
| Solyc03g114900.2.1 | Tomato | extracellular | 12.99 | 11.19 |
| Solyc01g111050.2.1 | Tomato | cytosol | 13.25 | 10.87 |
| Solyc03g114880.1.1 | Tomato | cytosol, extracellular, vacuole | 8.83 | 10.66 |
| Solyc02g064790.1.1 | Tomato | extracellular, vacuole | 1.04 | 5.8 |
| PGSC0003DMT400002667 | Potato | cytosol, golgi, peroxisome | 0.52 | 1.28 |
| Solyc03g070450.1.1 | Tomato | extracellular, vacuole | 0.52 | 0.93 |
| PGSC0003DMT400081003 | Potato | cytosol | 0.26 | 0.86 |
Protein Annotations
| EnsemblPlants:Solyc02g080240.1.1 | EnsemblPlantsGene:Solyc02g080240.1 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | InterPro:COBRA_pln |
| PANTHER:PTHR31052 | PANTHER:PTHR31052:SF11 | PFAM:PD140986 | PFAM:PF04833 | SEG:seg | SignalP:SignalP-noTM |
| UniParc:UPI0002768E2B | UniProt:K4B9P5 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2:+:44509982..44511219
Molecular Weight (calculated)
43512.6 Da
IEP (calculated)
9.274
GRAVY (calculated)
-0.307
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMFSKSMIF YILLFSVNIK AQDYDGKLPP AENNCNGIFL SYVFISRTKE LPHVKNATAQ AWAFKATATV LNAGIYELKN WKIFIGFQNR ELLVSASNAV
101: LLSGDDLPAP VGNGTYLAGY PQTDLKTSID TAGDVKKIQA EIELTGTQFG IKPPGYPMPK TIKLFNDGYK CPAVKRKATK MHVCCLKDPK FKVKNFTTKF
201: FPRQNGDLLI SYDVMQAYTT NYQAQVTIQN SNPLGRLDQW NLTWEWMRGE FIYSMRGAYT RKKDYSNCVY GAAGQYYKDF DFSKVLNCEK KPTIADLPRE
301: RAQDKDVGML PFCCRNGSIM PTVMDATNSK SVFQLQVYKL PPDLNLTALY PPERWKIVGL LNPDYKCGQA LRVDDAQFLD PTGLC
101: LLSGDDLPAP VGNGTYLAGY PQTDLKTSID TAGDVKKIQA EIELTGTQFG IKPPGYPMPK TIKLFNDGYK CPAVKRKATK MHVCCLKDPK FKVKNFTTKF
201: FPRQNGDLLI SYDVMQAYTT NYQAQVTIQN SNPLGRLDQW NLTWEWMRGE FIYSMRGAYT RKKDYSNCVY GAAGQYYKDF DFSKVLNCEK KPTIADLPRE
301: RAQDKDVGML PFCCRNGSIM PTVMDATNSK SVFQLQVYKL PPDLNLTALY PPERWKIVGL LNPDYKCGQA LRVDDAQFLD PTGLC
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.