Factsheet for Bra035948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g070460.1.1	Tomato	cytosol	38.14	31.9
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	61.86	29.13
Bra008684.1-P	Field mustard	extracellular	53.61	13.44
Bra012996.1-P	Field mustard	plasma membrane	60.82	12.91
Bra035951.1-P	Field mustard	plasma membrane	60.82	12.88
Bra025406.1-P	Field mustard	extracellular	55.67	12.39
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.58	11.75
Bra040587.1-P	Field mustard	extracellular	51.55	11.39
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	52.58	11.21
Bra030800.1-P	Field mustard	cytosol	38.14	8.87
Bra019992.1-P	Field mustard	cytosol	36.08	8.82
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	23.71	6.05
Solyc02g080240.1.1	Tomato	extracellular	23.71	5.97
Bra020151.1-P	Field mustard	cytosol	11.34	4.25
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	25.77	3.74
Bra023941.1-P	Field mustard	plasma membrane	25.77	3.72
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	23.71	3.52
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	22.68	3.32
Bra033528.1-P	Field mustard	plasma membrane	21.65	3.19
Bra036147.1-P	Field mustard	plasma membrane	19.59	2.87
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	19.59	2.85
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	0.0	0.0
PGSC0003DMT400002667	Potato	cytosol, golgi, peroxisome	0.0	0.0
PGSC0003DMT400081003	Potato	cytosol	0.0	0.0
Solyc03g070450.1.1	Tomato	extracellular, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:Bra035948.1	EnsemblPlants:Bra035948.1-P	EnsemblPlantsGene:Bra035948	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31673	PANTHER:PTHR31673:SF3	PFAM:PD140986	PFAM:PF04833	UniParc:UPI0002541FB5
UniProt:M4F4E8	MapMan:35.1	:	:	:	:

Description

AT5G60950 (E=9e-028) COBL5 | COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)

Coordinates

chrA09:-:2791638..2791931

Molecular Weight (calculated)

10300.5 Da

IEP (calculated)

9.845

GRAVY (calculated)

-0.225

Length

97 amino acids

Sequence
(BLAST)

1: MAGAQTTEQG DCSMYKGNIP KSCVLKPTVI DLLPGTPYNQ QISNRCKGGV LKPGLASSFQ ITVGAAGTSN STVRMAEHLN SSIFVDRRPR TLCGRSL

Best Arabidopsis Sequence Match ( AT5G60950.1 )
(BLAST)

001: MESLFSTMIV LLLVSFSCLI STEALTSNYG NITVKWDLLN WTPDGYVAVV TAYNYQKQRS IPGWKMSWRG TKKEVIWNML GAKTTGQGGC SMFKGNIPQS
101: CVRKPTVVDL LPGTPFNQQI ANCCKSGVLK PGSESAFQLS VGSAGNSVKT ARMPANFMFT APKQQYICGP SKNVRPTRFT TADKRRITAA LMTWNITCVF
201: HKAT

Arabidopsis Description

COBL5COBRA-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.