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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60470 Canola plasma membrane 97.58 96.94
CDY43250 Canola plasma membrane 96.48 96.06
AT3G02210.1 Thale cress extracellular 89.23 89.82
Bra025406.1-P Field mustard extracellular 72.75 75.92
KRH72178 Soybean mitochondrion 60.66 74.8
KRH01360 Soybean extracellular, golgi, plasma membrane 70.55 71.65
Bra040587.1-P Field mustard extracellular 68.57 71.07
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 71.21 70.9
KRH45084 Soybean extracellular, golgi, plasma membrane 69.67 70.76
KRG93684 Soybean extracellular, vacuole 69.67 69.82
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 69.23 68.78
Bra012996.1-P Field mustard plasma membrane 69.01 68.71
KRH18352 Soybean plasma membrane 68.79 68.34
Zm00001d031479_P001 Maize cytosol, mitochondrion 24.62 68.29
Os07t0604300-01 Rice extracellular 66.37 67.71
Bra035951.1-P Field mustard plasma membrane 67.91 67.47
EER97506 Sorghum extracellular, plasma membrane 67.47 67.03
GSMUA_Achr2P06240_001 Banana mitochondrion 69.45 66.25
Zm00001d013256_P001 Maize extracellular 65.05 65.92
EER90860 Sorghum extracellular, golgi, plasma membrane 65.05 65.92
Os05t0386800-01 Rice extracellular 65.93 65.65
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 66.15 65.43
TraesCS6D01G364400.1 Wheat extracellular 63.52 64.65
EER90859 Sorghum extracellular 60.22 64.47
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 63.74 64.16
Os03t0754500-00 Rice extracellular 30.11 64.02
OQU92393 Sorghum extracellular 64.62 63.77
TraesCS6B01G418400.1 Wheat extracellular 62.64 63.76
Os03t0416300-01 Rice extracellular 64.18 63.76
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 60.66 63.59
TraesCS6A01G379800.1 Wheat extracellular 62.42 63.53
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 63.52 63.24
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 63.3 63.02
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 63.08 62.8
Bra008684.1-P Field mustard extracellular 52.75 62.02
HORVU5Hr1G095910.12 Barley extracellular, vacuole 62.64 61.96
TraesCS4A01G231200.1 Wheat extracellular 61.32 60.65
TraesCS2A01G175100.1 Wheat extracellular 60.22 60.49
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 16.26 60.16
TraesCS3A01G409900.1 Wheat plastid 36.48 59.93
TraesCS4D01G082700.1 Wheat extracellular 60.66 59.87
TraesCS4B01G084800.1 Wheat extracellular 59.78 59.78
TraesCS2D01G182500.1 Wheat golgi 59.78 59.78
HORVU4Hr1G014530.1 Barley extracellular 60.66 59.61
TraesCS2B01G201500.1 Wheat plasma membrane 58.9 58.39
HORVU2Hr1G033070.14 Barley mitochondrion 60.0 58.09
Os10t0497700-01 Rice extracellular 52.75 56.47
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 51.21 55.74
TraesCS5D01G402000.1 Wheat extracellular 27.69 55.26
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 56.48 54.45
TraesCS5B01G397000.2 Wheat extracellular 27.03 54.19
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 24.4 53.88
TraesCS3D01G404800.2 Wheat plasma membrane 53.63 53.39
Bra035948.1-P Field mustard cytosol 11.21 52.58
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 31.87 51.97
Bra030800.1-P Field mustard cytosol 46.59 50.84
Bra019992.1-P Field mustard cytosol 42.64 48.87
Bra035768.1-P Field mustard mitochondrion, peroxisome, plastid 19.34 23.16
Bra033528.1-P Field mustard plasma membrane 28.13 19.42
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.47 18.74
Bra020151.1-P Field mustard cytosol 10.55 18.53
Bra023941.1-P Field mustard plasma membrane 26.81 18.15
Bra036147.1-P Field mustard plasma membrane 25.93 17.82
Bra001795.1-P Field mustard endoplasmic reticulum, vacuole 25.71 17.52
Bra026378.1-P Field mustard extracellular, golgi, vacuole 24.18 16.85
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 23.74 16.29
Protein Annotations
EnsemblPlants:Bra039163.1EnsemblPlants:Bra039163.1-PEnsemblPlantsGene:Bra039163GO:GO:0005575GO:GO:0008150GO:GO:0009987
GO:GO:0010215GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
InterPro:COBRA_plnPANTHER:PTHR31673PANTHER:PTHR31673:SF3PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122
SEG:segSignalP:SignalP-noTMUniParc:UPI000254764EUniProt:M4FDJ2MapMan:21.1.2.2:
Description
AT3G02210 (E=1e-245) COBL1 | COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)
Coordinates
chrA05:+:23690026..23692030
Molecular Weight (calculated)
50411.3 Da
IEP (calculated)
8.983
GRAVY (calculated)
-0.136
Length
455 amino acids
Sequence
(BLAST)
001: MGFLCSSSSS SSSIVFKLGV SLVFLVSFSS YTPADAYDPL DPSGNITIKW DIITWTGDGY VATVTMYNFQ QYRHIQAPGW TLGWSWAKRE VIWGMNGGQT
101: TEQGDCSKFK GTIPHCCKKT PSVVDLLPGT PYNQQVANCC RGGVINSWAQ DPATAVSSFQ LTVGQAGTTN KTVRVPKNFT LKAPGPGYTC GPGKIVKPSR
201: FVGTDKRRVT QAMMTWNVTC TYSQFLAQRT PTCCVSLSSF YNSTIVPCPT CSCGCRNTSQ PGNCVDSKGP RIASVVPNTG KSLYVPPLVQ CTNHMCPVRI
301: HWHVKVNYKA YWRVKVTITN FNYNMNYSQW NLVVQHPNFD NLTQTFSFNY KPLIPYASIN DTGILWGVKF YNDLLMEAGP YGNVQSELLF QKEASAFTLE
401: KGWAFPRRIY FNGDNCVMPP PDSYPWLPNT ASNKPIGSLF AAISLLLTVL LHVNL
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.