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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02181 Canola endoplasmic reticulum, extracellular 100.0 100.0
CDY58695 Canola extracellular 94.17 94.17
AT5G60950.1 Thale cress endoplasmic reticulum 81.07 81.86
Bra035948.1-P Field mustard cytosol 29.13 61.86
PGSC0003DMT400082702 Potato extracellular 55.34 45.97
HORVU2Hr1G033080.1 Barley extracellular 34.95 39.13
Bra012996.1-P Field mustard plasma membrane 62.62 28.23
Bra025406.1-P Field mustard extracellular 58.25 27.52
Bra035951.1-P Field mustard plasma membrane 61.16 27.51
Bra008684.1-P Field mustard extracellular 50.97 27.13
PGSC0003DMT400003723 Potato extracellular 56.8 26.96
Bra040587.1-P Field mustard extracellular 56.8 26.65
VIT_14s0083g01150.t01 Wine grape plasma membrane 55.34 26.45
PGSC0003DMT400002674 Potato plasma membrane 55.34 26.27
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 56.31 25.95
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 53.88 25.58
EER99679 Sorghum plasma membrane 55.34 25.56
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 54.85 25.28
Os07t0604400-00 Rice extracellular 54.85 25.06
TraesCS2D01G182400.1 Wheat plasma membrane 53.88 24.83
TraesCS2B01G201400.1 Wheat plasma membrane 53.88 24.78
TraesCS2A01G175000.1 Wheat plasma membrane 53.88 24.72
EER94687 Sorghum extracellular 52.91 24.44
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 53.88 24.4
GSMUA_Achr4P14440_001 Banana plasma membrane 53.4 24.02
TraesCS5A01G095200.1 Wheat extracellular 51.94 23.83
TraesCS5D01G107900.1 Wheat extracellular 51.94 23.83
TraesCS5B01G101400.1 Wheat extracellular 51.94 23.78
Zm00001d047276_P001 Maize plasma membrane 51.94 23.78
Os03t0416200-01 Rice extracellular, golgi, plasma membrane 51.94 22.86
HORVU0Hr1G004650.3 Barley mitochondrion 44.66 22.17
HORVU2Hr1G033060.13 Barley mitochondrion 44.66 20.58
HORVU3Hr1G007580.2 Barley extracellular 34.95 19.2
Bra030800.1-P Field mustard cytosol 36.41 17.99
Bra019992.1-P Field mustard cytosol 31.07 16.12
Bra035768.1-P Field mustard mitochondrion, peroxisome, plastid 18.45 10.0
Bra020151.1-P Field mustard cytosol 11.65 9.27
HORVU3Hr1G009960.1 Barley plastid 9.22 8.72
Bra033528.1-P Field mustard plasma membrane 26.21 8.19
Bra001795.1-P Field mustard endoplasmic reticulum, vacuole 25.73 7.93
Bra023941.1-P Field mustard plasma membrane 25.24 7.74
Bra036147.1-P Field mustard plasma membrane 24.27 7.55
Bra026378.1-P Field mustard extracellular, golgi, vacuole 22.82 7.2
Bra021208.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 22.33 6.9
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 21.84 6.79
TraesCS3D01G047900.1 Wheat plastid 2.91 2.41
TraesCSU01G047200.1 Wheat plastid 2.43 2.16
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 0.0 0.0
Protein Annotations
MapMan:21.1.2.2EnsemblPlantsGene:Bra012993EnsemblPlants:Bra012993.1EnsemblPlants:Bra012993.1-PInterPro:COBRA_plnGO:GO:0002239
GO:GO:0005575GO:GO:0008150GO:GO:0009605GO:GO:0009607GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007UniProt:M4D933
PFAM:PD140986PFAM:PF04833PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-noTMUniParc:UPI00025404FF
Description
AT5G60950 (E=5e-098) COBL5 | COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)
Coordinates
chrA03:-:21161464..21162351
Molecular Weight (calculated)
23061.2 Da
IEP (calculated)
10.414
GRAVY (calculated)
-0.168
Length
206 amino acids
Sequence
(BLAST)
001: MESLFSAMIV LLLVSSSCFT SSEALTSNKG NITIKWDLMT WTPDGYVAVV SAYNYQKQRS IPSPGWKMSW RWTRKEVIWS MVGARTTKQG DCSMFKGNIP
101: HSCINKPTVI DLPPKTPYNQ QIANCCKGGV LKPGLESAFQ ISVGQAGTTV KTVRMPVNFM FTAPKQQYIC GPTKNVRPTT FITADKRRMT RALMTWNITC
201: VFHKAT
Best Arabidopsis Sequence Match ( AT5G60950.1 )
(BLAST)
001: MESLFSTMIV LLLVSFSCLI STEALTSNYG NITVKWDLLN WTPDGYVAVV TAYNYQKQRS IPGWKMSWRG TKKEVIWNML GAKTTGQGGC SMFKGNIPQS
101: CVRKPTVVDL LPGTPFNQQI ANCCKSGVLK PGSESAFQLS VGSAGNSVKT ARMPANFMFT APKQQYICGP SKNVRPTRFT TADKRRITAA LMTWNITCVF
201: HKAT
Arabidopsis Description
COBL5COBRA-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.