Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g05050.t01 | Wine grape | cytosol | 16.51 | 60.0 |
| HORVU3Hr1G007580.2 | Barley | extracellular | 80.73 | 46.93 |
| CDY26445 | Canola | cytosol | 36.24 | 46.75 |
| KRH18350 | Soybean | cytosol | 37.61 | 46.07 |
| TraesCS5D01G107900.1 | Wheat | extracellular | 91.74 | 44.54 |
| TraesCS5B01G101400.1 | Wheat | extracellular | 91.74 | 44.44 |
| TraesCS5A01G095200.1 | Wheat | extracellular | 91.28 | 44.32 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 82.57 | 38.46 |
| Zm00001d047276_P001 | Maize | plasma membrane | 79.36 | 38.44 |
| EER94687 | Sorghum | extracellular | 78.44 | 38.34 |
| HORVU0Hr1G004650.3 | Barley | mitochondrion | 64.22 | 33.73 |
| GSMUA_Achr4P14440_001 | Banana | plasma membrane | 69.27 | 32.97 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 65.14 | 32.95 |
| KRH45086 | Soybean | plasma membrane | 65.14 | 32.95 |
| KRH01361 | Soybean | extracellular, plasma membrane, vacuole | 65.14 | 32.95 |
| Solyc03g114900.2.1 | Tomato | extracellular | 66.97 | 32.66 |
| GSMUA_Achr4P03210_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 66.97 | 32.66 |
| PGSC0003DMT400003723 | Potato | extracellular | 64.68 | 32.49 |
| Solyc02g089130.2.1 | Tomato | extracellular | 64.22 | 32.26 |
| PGSC0003DMT400063055 | Potato | extracellular, mitochondrion | 66.97 | 32.09 |
| Bra023528.1-P | Field mustard | extracellular, plasma membrane, vacuole | 63.76 | 32.03 |
| PGSC0003DMT400002674 | Potato | plasma membrane | 63.76 | 32.03 |
| Solyc03g070440.2.1 | Tomato | extracellular | 63.3 | 32.02 |
| KRG93686 | Soybean | extracellular, plasma membrane, vacuole | 62.84 | 31.79 |
| HORVU2Hr1G033060.13 | Barley | mitochondrion | 65.14 | 31.77 |
| VIT_14s0083g01150.t01 | Wine grape | plasma membrane | 61.47 | 31.09 |
| KRH54737 | Soybean | plasma membrane | 58.26 | 27.73 |
| Bra008684.1-P | Field mustard | extracellular | 49.08 | 27.65 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 58.26 | 27.61 |
| KRH63180 | Soybean | plasma membrane | 57.8 | 27.51 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 55.05 | 25.53 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 53.67 | 25.27 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 54.13 | 25.0 |
| PGSC0003DMT400082702 | Potato | extracellular | 22.94 | 20.16 |
| VIT_17s0000g05060.t01 | Wine grape | plasma membrane | 65.6 | 15.36 |
| Solyc02g064790.1.1 | Tomato | extracellular, vacuole | 3.67 | 11.59 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 12.84 | 10.04 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 8.72 | 9.31 |
| HORVU2Hr1G015440.1 | Barley | cytosol | 23.39 | 9.26 |
| Bra012993.1-P | Field mustard | endoplasmic reticulum, extracellular | 8.72 | 9.22 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 25.23 | 8.18 |
| HORVU0Hr1G030030.1 | Barley | extracellular, plasma membrane | 23.39 | 7.72 |
| HORVU4Hr1G054770.1 | Barley | plastid | 23.39 | 6.46 |
| HORVU2Hr1G092510.1 | Barley | mitochondrion | 5.05 | 3.44 |
| HORVU2Hr1G033080.1 | Barley | extracellular | 1.38 | 1.63 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G009960.1 | EnsemblPlantsGene:HORVU3Hr1G009960 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | InterPro:COBRA_pln |
| PANTHER:PTHR31673 | PANTHER:PTHR31673:SF2 | PFAM:PD140986 | PFAM:PF04833 | UniParc:UPI000B471FF4 | UniProt:A0A287K2P6 |
| MapMan:21.1.2.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:20940933..20941589
Molecular Weight (calculated)
24147.8 Da
IEP (calculated)
9.497
GRAVY (calculated)
-0.369
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: GLGYTCGPAT VVPSTVYWSA DHRRKTQALM TWTVTCTYSQ QLASRYPTCC VSFSSFYNST IVPCARCACG CGAHKSTGGR GGKSHSDGCI AGDSKRALTP
101: GVNTPKKDGA QLLQCTNHMC PIRVHWHVKL NYKDYWRAKI AVTNFNYRMN YTQWTLVAQH PNLNNVTEVF SFQYKPLLPY GNINDTGMFY GLKLYNDLLM
201: GGRPVRQRAV GGAHAQGD
101: GVNTPKKDGA QLLQCTNHMC PIRVHWHVKL NYKDYWRAKI AVTNFNYRMN YTQWTLVAQH PNLNNVTEVF SFQYKPLLPY GNINDTGMFY GLKLYNDLLM
201: GGRPVRQRAV GGAHAQGD
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.