Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 81.86 | 81.07 |
| Bra012993.1-P | Field mustard | endoplasmic reticulum, extracellular | 81.86 | 81.07 |
| CDY58695 | Canola | extracellular | 79.9 | 79.13 |
| PGSC0003DMT400082702 | Potato | extracellular | 52.45 | 43.15 |
| HORVU2Hr1G033080.1 | Barley | extracellular | 34.8 | 38.59 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 57.84 | 25.88 |
| PGSC0003DMT400003723 | Potato | extracellular | 53.43 | 25.12 |
| VIT_14s0083g01150.t01 | Wine grape | plasma membrane | 52.94 | 25.06 |
| PGSC0003DMT400002674 | Potato | plasma membrane | 52.45 | 24.65 |
| GSMUA_Achr4P03210_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 53.92 | 24.61 |
| AT3G02210.1 | Thale cress | extracellular | 53.92 | 24.34 |
| AT3G29810.1 | Thale cress | extracellular | 51.96 | 24.04 |
| EER99679 | Sorghum | plasma membrane | 52.45 | 23.99 |
| Zm00001d022082_P001 | Maize | extracellular, plasma membrane, vacuole | 51.96 | 23.71 |
| TraesCS2D01G182400.1 | Wheat | plasma membrane | 51.96 | 23.71 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 50.0 | 23.67 |
| TraesCS2B01G201400.1 | Wheat | plasma membrane | 51.96 | 23.66 |
| TraesCS2A01G175000.1 | Wheat | plasma membrane | 51.96 | 23.61 |
| EER94687 | Sorghum | extracellular | 50.98 | 23.32 |
| Os07t0604400-00 | Rice | extracellular | 50.98 | 23.06 |
| Zm00001d047276_P001 | Maize | plasma membrane | 50.49 | 22.89 |
| GSMUA_Achr4P14440_001 | Banana | plasma membrane | 50.98 | 22.71 |
| TraesCS5D01G107900.1 | Wheat | extracellular | 49.02 | 22.27 |
| TraesCS5A01G095200.1 | Wheat | extracellular | 49.02 | 22.27 |
| TraesCS5B01G101400.1 | Wheat | extracellular | 49.02 | 22.22 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 50.49 | 22.01 |
| HORVU0Hr1G004650.3 | Barley | mitochondrion | 42.65 | 20.96 |
| HORVU2Hr1G033060.13 | Barley | mitochondrion | 42.65 | 19.46 |
| AT1G09790.1 | Thale cress | plasma membrane | 41.18 | 18.5 |
| HORVU3Hr1G007580.2 | Barley | extracellular | 33.82 | 18.4 |
| HORVU3Hr1G009960.1 | Barley | plastid | 9.31 | 8.72 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.0 | 7.72 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 23.53 | 7.14 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.04 | 7.09 |
| AT4G27110.1 | Thale cress | extracellular | 22.06 | 6.74 |
| AT3G16860.1 | Thale cress | plasma membrane | 20.59 | 6.43 |
| TraesCS3D01G047900.1 | Wheat | plastid | 2.94 | 2.41 |
| TraesCSU01G047200.1 | Wheat | plastid | 2.45 | 2.16 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:836216 | ProteinID:AED97402.1 | ArrayExpress:AT5G60950 | EnsemblPlantsGene:AT5G60950 | RefSeq:AT5G60950 |
| TAIR:AT5G60950 | RefSeq:AT5G60950-TAIR-G | EnsemblPlants:AT5G60950.1 | TAIR:AT5G60950.1 | Unigene:At.20668 | ProteinID:BAB10644.1 |
| EMBL:BT010831 | EMBL:BT011296 | Symbol:COBL5 | InterPro:COBRA_pln | GO:GO:0002239 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | RefSeq:NP_200903.1 | PFAM:PD140986 |
| PFAM:PF04833 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31673 |
| PANTHER:PTHR31673:SF3 | UniProt:Q9FME5 | SignalP:SignalP-noTM | UniParc:UPI0000048CBF | : | : |
Description
COBL5COBRA-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME5]
Coordinates
chr5:-:24526847..24528151
Molecular Weight (calculated)
22481.4 Da
IEP (calculated)
10.343
GRAVY (calculated)
-0.088
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLFSTMIV LLLVSFSCLI STEALTSNYG NITVKWDLLN WTPDGYVAVV TAYNYQKQRS IPGWKMSWRG TKKEVIWNML GAKTTGQGGC SMFKGNIPQS
101: CVRKPTVVDL LPGTPFNQQI ANCCKSGVLK PGSESAFQLS VGSAGNSVKT ARMPANFMFT APKQQYICGP SKNVRPTRFT TADKRRITAA LMTWNITCVF
201: HKAT
101: CVRKPTVVDL LPGTPFNQQI ANCCKSGVLK PGSESAFQLS VGSAGNSVKT ARMPANFMFT APKQQYICGP SKNVRPTRFT TADKRRITAA LMTWNITCVF
201: HKAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.