Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040587.1-P | Field mustard | extracellular | 83.67 | 84.05 |
| CDY70289 | Canola | extracellular | 75.51 | 83.88 |
| KRH72178 | Soybean | mitochondrion | 60.32 | 72.09 |
| AT3G02210.1 | Thale cress | extracellular | 73.7 | 71.9 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 72.34 | 71.21 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 71.88 | 70.76 |
| KRG93684 | Soybean | extracellular, vacuole | 70.52 | 68.5 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 70.75 | 68.42 |
| GSMUA_Achr4P01440_001 | Banana | extracellular, plasma membrane | 70.75 | 68.27 |
| Os07t0604300-01 | Rice | extracellular | 68.93 | 68.16 |
| GSMUA_Achr1P24500_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 70.52 | 67.9 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 25.17 | 67.68 |
| Zm00001d013256_P001 | Maize | extracellular | 68.71 | 67.48 |
| KRH18352 | Soybean | plasma membrane | 69.84 | 67.25 |
| EER90860 | Sorghum | extracellular, golgi, plasma membrane | 68.03 | 66.82 |
| TraesCS6A01G379800.1 | Wheat | extracellular | 67.57 | 66.67 |
| EER97506 | Sorghum | extracellular, plasma membrane | 68.93 | 66.38 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 66.89 | 66.0 |
| Os03t0754500-00 | Rice | extracellular | 31.97 | 65.89 |
| GSMUA_Achr2P06240_001 | Banana | mitochondrion | 71.2 | 65.83 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 66.67 | 65.77 |
| Os05t0386800-01 | Rice | extracellular | 68.03 | 65.65 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 66.89 | 65.27 |
| TraesCS5A01G392000.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 67.12 | 64.77 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 67.35 | 64.57 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 66.89 | 64.55 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 66.67 | 64.33 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 62.81 | 64.27 |
| EER90859 | Sorghum | extracellular | 61.9 | 64.24 |
| OQU92393 | Sorghum | extracellular | 66.67 | 63.77 |
| Os03t0416300-01 | Rice | extracellular | 65.53 | 63.1 |
| HORVU5Hr1G095910.12 | Barley | extracellular, vacuole | 65.08 | 62.39 |
| TraesCS3A01G409900.1 | Wheat | plastid | 37.87 | 60.29 |
| TraesCS4A01G231200.1 | Wheat | extracellular | 62.59 | 60.0 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 62.36 | 59.65 |
| TraesCS2A01G175100.1 | Wheat | extracellular | 61.22 | 59.6 |
| HORVU4Hr1G014530.1 | Barley | extracellular | 62.13 | 59.18 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 61.0 | 59.12 |
| TraesCS2D01G182500.1 | Wheat | golgi | 60.77 | 58.9 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 61.0 | 57.23 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 59.18 | 56.86 |
| Os10t0497700-01 | Rice | extracellular | 54.42 | 56.47 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 59.64 | 55.72 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 52.61 | 55.5 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 28.34 | 55.07 |
| HORVU5Hr1G096010.13 | Barley | endoplasmic reticulum | 34.69 | 54.84 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 28.12 | 54.39 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 55.56 | 53.61 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 24.04 | 51.96 |
| AT1G09790.1 | Thale cress | plasma membrane | 47.85 | 46.48 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 27.44 | 18.31 |
| AT3G16860.1 | Thale cress | plasma membrane | 26.53 | 17.92 |
| AT4G27110.1 | Thale cress | extracellular | 26.98 | 17.81 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 26.53 | 17.65 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 25.85 | 16.96 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:822697 | ProteinID:AAG12670.1 | ProteinID:AEE77616.1 | ArrayExpress:AT3G29810 | EnsemblPlantsGene:AT3G29810 |
| RefSeq:AT3G29810 | TAIR:AT3G29810 | RefSeq:AT3G29810-TAIR-G | EnsemblPlants:AT3G29810.1 | TAIR:AT3G29810.1 | EMBL:AY088873 |
| ProteinID:BAB02996.1 | Symbol:COBL2 | InterPro:COBRA_pln | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009664 | GO:GO:0009791 | GO:GO:0009832 |
| GO:GO:0009987 | GO:GO:0010214 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | GO:GO:0046658 | GO:GO:0048316 | GO:GO:0048354 |
| GO:GO:0052324 | RefSeq:NP_566851.1 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF3 | UniProt:Q8L8Q7 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00001635EC | SEG:seg | : | : | : | : |
Description
COBL3COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7]
Coordinates
chr3:+:11728024..11730350
Molecular Weight (calculated)
49699.8 Da
IEP (calculated)
8.668
GRAVY (calculated)
-0.085
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MNILFSRFSF LLLFLCSWTS FTFTTTEAYD ALDPYGNITI KWDIMSWTGD GYVAVVTIFN FQQYRHIEAP GWQLGWSWMK KEVIWSMVGG QATEQGDCSK
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
101: FKGNIPHCCK KTPAIVDLLP GTPYNQQISN CCRGGVISAW AQDPATAISS FQISVGQSGT TNTTVRAPRN ITLKAPGPGY TCGPAKLVKP SRFISADKRR
201: KTQSLLTWNI TCTYSQFLAR KTPTCCVSLS AFYNETIVPC PTCSCGCQNS SQAGTCVDPK IASVVPALGK NNLEPLLQCT QHMCPIRVHW HVKTSYKEYW
301: RVKVAITNFN YNMNYSQWNL VVQHPNFDNL TKLFSFNYKP LNPYLNINDT AMLWGIKFYN DFLSQAGPVG NVQSELLFQK NPLEFTFEKG WAFPRRIYFN
401: GDNCVMPPPD SYPWLPNASP NIATSPFVIL LITFLSVLIL M
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.