Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.18 | 75.79 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 75.34 | 73.76 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 74.58 | 73.68 |
| Bra021208.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 74.89 | 73.31 |
| PGSC0003DMT400065836 | Potato | cytosol | 45.64 | 63.54 |
| VIT_05s0077g01470.t01 | Wine grape | plasma membrane | 62.02 | 62.21 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 60.95 | 61.8 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 60.49 | 61.43 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 60.34 | 60.8 |
| PGSC0003DMT400065840 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 60.34 | 60.52 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 59.42 | 58.52 |
| VIT_07s0005g01020.t01 | Wine grape | plasma membrane | 57.27 | 57.81 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 57.12 | 57.21 |
| KRH37033 | Soybean | extracellular | 56.81 | 57.08 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 52.53 | 51.42 |
| GSMUA_Achr11P... | Banana | plasma membrane | 52.22 | 50.44 |
| Zm00001d028826_P001 | Maize | plasma membrane | 49.92 | 48.88 |
| TraesCS4B01G187300.1 | Wheat | golgi | 49.77 | 48.73 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 49.62 | 48.36 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 49.62 | 48.29 |
| TraesCS4D01G188600.1 | Wheat | golgi | 49.62 | 48.14 |
| TraesCS4A01G117100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 49.31 | 47.85 |
| Zm00001d007208_P001 | Maize | extracellular, plasma membrane, vacuole | 47.63 | 47.55 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 48.24 | 46.88 |
| OQU90545 | Sorghum | extracellular, plasma membrane, vacuole | 46.71 | 46.14 |
| TraesCS2B01G107700.1 | Wheat | plasma membrane | 46.09 | 45.68 |
| GSMUA_Achr8P10390_001 | Banana | cytosol | 17.46 | 45.6 |
| HORVU0Hr1G030030.1 | Barley | extracellular, plasma membrane | 45.94 | 45.39 |
| AT4G27110.1 | Thale cress | extracellular | 46.25 | 45.21 |
| TraesCS2D01G092100.1 | Wheat | plasma membrane | 45.64 | 45.15 |
| Os07t0690900-01 | Rice | plasma membrane | 45.33 | 43.85 |
| HORVU2Hr1G015440.1 | Barley | cytosol | 36.29 | 43.01 |
| TraesCS2A01G092900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 45.33 | 42.77 |
| HORVU4Hr1G054770.1 | Barley | plastid | 49.16 | 40.63 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 18.99 | 28.77 |
| AT3G29810.1 | Thale cress | extracellular | 17.92 | 26.53 |
| AT1G09790.1 | Thale cress | plasma membrane | 17.92 | 25.77 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 17.0 | 24.34 |
| AT3G02210.1 | Thale cress | extracellular | 16.85 | 24.34 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 6.43 | 20.59 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:820941 | UniProt:A0A178VBK2 | ProteinID:AEE75877.1 | ArrayExpress:AT3G16860 | EnsemblPlantsGene:AT3G16860 |
| RefSeq:AT3G16860 | TAIR:AT3G16860 | RefSeq:AT3G16860-TAIR-G | EnsemblPlants:AT3G16860.1 | TAIR:AT3G16860.1 | Unigene:At.183 |
| ProteinID:BAB03074.1 | Symbol:COBL8 | InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0031225 | GO:GO:0040007 | RefSeq:NP_188311.1 | ProteinID:OAP03266.1 | PFAM:PD140986 | PFAM:PF04833 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF3 | UniProt:Q9LIB6 |
| SignalP:SignalP-noTM | UniParc:UPI00000A4C7C | EMBL:Y14424 | SEG:seg | : | : |
Description
COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
Coordinates
chr3:-:5759375..5762264
Molecular Weight (calculated)
72027.1 Da
IEP (calculated)
8.572
GRAVY (calculated)
-0.218
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.