Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36030 | Canola | vacuole | 86.16 | 89.35 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 88.39 | 88.92 |
| Bra023941.1-P | Field mustard | plasma membrane | 88.84 | 88.84 |
| Bra001795.1-P | Field mustard | endoplasmic reticulum, vacuole | 88.24 | 88.77 |
| Bra035768.1-P | Field mustard | mitochondrion, peroxisome, plastid | 49.26 | 87.11 |
| CDY19626 | Canola | mitochondrion | 51.34 | 83.74 |
| CDY57659 | Canola | cytosol | 18.01 | 79.08 |
| CDY55591 | Canola | plasma membrane | 86.9 | 70.19 |
| CDY43072 | Canola | plasma membrane | 86.16 | 68.52 |
| AT4G27110.1 | Thale cress | extracellular | 67.56 | 67.96 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 59.23 | 60.76 |
| PGSC0003DMT400002678 | Potato | vacuole | 59.52 | 60.51 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 58.78 | 60.4 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 54.91 | 60.0 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 56.25 | 57.62 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 56.85 | 56.93 |
| PGSC0003DMT400037398 | Potato | vacuole | 56.1 | 56.86 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 55.8 | 56.39 |
| KRH27088 | Soybean | mitochondrion | 56.25 | 56.33 |
| KRH22248 | Soybean | golgi, vacuole | 55.51 | 56.01 |
| KXG36369 | Sorghum | mitochondrion | 54.17 | 54.09 |
| Zm00001d021661_P001 | Maize | mitochondrion | 54.17 | 53.69 |
| PGSC0003DMT400002688 | Potato | cytosol | 10.27 | 53.49 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 52.83 | 52.67 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 52.53 | 52.53 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 52.68 | 52.52 |
| Os06t0685100-00 | Rice | plasma membrane | 53.12 | 52.27 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 52.38 | 52.23 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 49.4 | 50.23 |
| AT3G16860.1 | Thale cress | plasma membrane | 46.88 | 48.24 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 46.28 | 46.91 |
| AT5G15630.1 | Thale cress | extracellular, plasma membrane, vacuole | 18.45 | 28.77 |
| AT3G29810.1 | Thale cress | extracellular | 16.96 | 25.85 |
| AT3G02210.1 | Thale cress | extracellular | 16.96 | 25.22 |
| AT1G09790.1 | Thale cress | plasma membrane | 16.96 | 25.11 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 16.37 | 24.12 |
| AT5G60950.1 | Thale cress | endoplasmic reticulum | 7.14 | 23.53 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:821605 | ProteinID:AEE76400.1 | EMBL:AK118605 | ArrayExpress:AT3G20580 | EnsemblPlantsGene:AT3G20580 |
| RefSeq:AT3G20580 | TAIR:AT3G20580 | RefSeq:AT3G20580-TAIR-G | EnsemblPlants:AT3G20580.1 | TAIR:AT3G20580.1 | Unigene:At.38215 |
| ProteinID:BAB01166.1 | EMBL:BT005952 | Symbol:COBL10 | InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | RefSeq:NP_188694.2 | PFAM:PD140986 |
| PFAM:PF04833 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | UniProt:Q9LJU0 |
| TMHMM:TMhelix | UniParc:UPI0000060DCC | SEG:seg | : | : | : |
Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
Coordinates
chr3:-:7187699..7190648
Molecular Weight (calculated)
74673.6 Da
IEP (calculated)
8.778
GRAVY (calculated)
-0.357
Length
672 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.