Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002688 | Potato | cytosol | 31.37 | 37.21 |
| CDY19626 | Canola | mitochondrion | 63.4 | 23.54 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 79.08 | 18.01 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 77.12 | 17.66 |
| CDY36030 | Canola | vacuole | 72.55 | 17.13 |
| CDY42842 | Canola | cytosol | 12.42 | 15.57 |
| CDY55591 | Canola | plasma membrane | 75.82 | 13.94 |
| CDY43072 | Canola | plasma membrane | 75.16 | 13.61 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 58.82 | 13.53 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 58.17 | 13.42 |
| CDY09102 | Canola | cytosol | 22.22 | 13.03 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 55.56 | 12.78 |
| PGSC0003DMT400002678 | Potato | vacuole | 54.25 | 12.56 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 55.56 | 12.45 |
| CDY26445 | Canola | cytosol | 13.73 | 12.43 |
| PGSC0003DMT400037398 | Potato | vacuole | 52.94 | 12.22 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 51.63 | 12.08 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 52.94 | 12.07 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 51.63 | 12.04 |
| CDY34424 | Canola | plasma membrane | 50.33 | 11.68 |
| KRH22248 | Soybean | golgi, vacuole | 50.33 | 11.56 |
| CDY32210 | Canola | plasma membrane | 49.67 | 11.52 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 49.02 | 11.45 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 49.67 | 11.43 |
| KRH27088 | Soybean | mitochondrion | 48.37 | 11.03 |
| CDY49611 | Canola | plasma membrane | 46.41 | 10.73 |
| CDY00037 | Canola | plasma membrane | 46.41 | 10.73 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.75 | 10.53 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.79 | 10.04 |
| Zm00001d021661_P001 | Maize | mitochondrion | 43.79 | 9.88 |
| KXG36369 | Sorghum | mitochondrion | 43.14 | 9.81 |
| Os06t0685100-00 | Rice | plasma membrane | 43.14 | 9.66 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 42.48 | 9.64 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 42.48 | 9.64 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 42.48 | 9.64 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 41.18 | 9.38 |
| CDX90983 | Canola | extracellular | 25.49 | 8.97 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 26.14 | 8.77 |
| CDX69511 | Canola | plasma membrane | 25.49 | 8.57 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 32.68 | 8.13 |
| CDY60470 | Canola | plasma membrane | 23.53 | 7.86 |
| CDX93481 | Canola | plasma membrane | 22.22 | 7.74 |
| CDY02184 | Canola | plasma membrane | 22.88 | 7.66 |
| CDY58691 | Canola | plasma membrane | 22.88 | 7.64 |
| CDY31063 | Canola | plasma membrane | 21.57 | 7.6 |
| CDY43250 | Canola | plasma membrane | 22.22 | 7.44 |
| CDX86358 | Canola | extracellular | 20.91 | 7.34 |
| CDX85277 | Canola | extracellular | 20.91 | 7.34 |
| CDY16831 | Canola | plasma membrane | 21.57 | 7.21 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 20.91 | 7.03 |
| CDX87193 | Canola | plasma membrane | 20.91 | 7.02 |
| CDX94950 | Canola | nucleus | 24.18 | 6.49 |
| CDY70289 | Canola | extracellular | 16.34 | 6.3 |
| CDY26444 | Canola | plastid | 13.73 | 5.74 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 25.49 | 4.55 |
| CDY14723 | Canola | cytosol | 3.92 | 1.89 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| CDX87194 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY66895 | Canola | cytosol | 0.0 | 0.0 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
| CDY29033 | Canola | cytosol | 0.0 | 0.0 |
| CDY58695 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY57659 | EnsemblPlantsGene:GSBRNA2T00022467001 | GO:A0A078IZ54 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | ProteinID:CDY57659 | ProteinID:CDY57659.1 | TMHMM:TMhelix | UniParc:UPI0004EDBD80 |
| UniProt:A0A078IZ54 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g15370DBnaC01g15370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ54]
Coordinates
chrLK033593:+:38787..39313
Molecular Weight (calculated)
17392.2 Da
IEP (calculated)
9.618
GRAVY (calculated)
-0.256
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIPKKLPCP DNCGVSINWH VNTDYRDGWT ARLTVFNWRD FAFEDWFVAL RWEKQVQGMK TSTPLMAHVF HQTTEPLYPP VPGKQQSVIS FKKKNIKGLN
101: IPEGDGFPTK LFFNGEECAL PKHFPKKSSG QRHGISVLMS LVLAIAAFAL MMD
101: IPEGDGFPTK LFFNGEECAL PKHFPKKSSG QRHGISVLMS LVLAIAAFAL MMD
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.