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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49611 Canola plasma membrane 99.4 99.4
Bra036147.1-P Field mustard plasma membrane 98.94 98.94
AT5G49270.1 Thale cress extracellular, plasma membrane, vacuole 86.56 86.43
CDY32210 Canola plasma membrane 64.35 64.55
CDY34424 Canola plasma membrane 64.2 64.49
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 58.91 58.65
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 58.16 57.72
GSMUA_AchrUn_... Banana plasma membrane 50.0 49.63
GSMUA_Achr11P... Banana plasma membrane 50.3 49.26
CDY19626 Canola mitochondrion 30.36 48.79
Zm00001d028826_P001 Maize plasma membrane 48.94 48.58
TraesCS4B01G187300.1 Wheat golgi 48.94 48.58
TraesCS4D01G188600.1 Wheat golgi 49.09 48.29
TraesCS4A01G117100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 49.09 48.29
CDY36030 Canola vacuole 46.98 47.99
EER95000 Sorghum endoplasmic reticulum, extracellular, plasma membrane 48.19 47.61
Os03t0301200-01 Rice extracellular, plasma membrane, vacuole 48.19 47.54
CDX82237 Canola endoplasmic reticulum, vacuole 47.13 46.71
CDY57659 Canola cytosol 10.73 46.41
GSMUA_Achr8P10390_001 Banana cytosol 17.52 46.4
OQU90545 Sorghum extracellular, plasma membrane, vacuole 46.07 46.14
Zm00001d007208_P001 Maize extracellular, plasma membrane, vacuole 45.17 45.72
CDY09102 Canola cytosol 17.98 45.59
TraesCS2B01G107700.1 Wheat plasma membrane 45.32 45.52
TraesCS2D01G092100.1 Wheat plasma membrane 45.17 45.3
CDY29275 Canola extracellular, plasma membrane, vacuole 45.47 45.26
CDX89278 Canola extracellular, golgi, vacuole 45.32 45.25
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 45.02 44.81
Os07t0690900-01 Rice plasma membrane 45.62 44.74
HORVU0Hr1G030030.1 Barley extracellular, plasma membrane 44.41 44.48
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 45.32 43.92
TraesCS2A01G092900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 44.86 42.92
HORVU2Hr1G015440.1 Barley cytosol 35.65 42.83
HORVU4Hr1G054770.1 Barley plastid 48.49 40.63
CDY55591 Canola plasma membrane 46.98 37.38
CDY43072 Canola plasma membrane 47.13 36.92
CDY66895 Canola cytosol 2.57 29.82
CDX90983 Canola extracellular 18.73 28.51
CDX93481 Canola plasma membrane 18.88 28.47
CDX85277 Canola extracellular 18.13 27.52
CDY70289 Canola extracellular 16.47 27.46
CDX85543 Canola extracellular, plasma membrane, vacuole 18.73 27.19
CDX86358 Canola extracellular 17.82 27.06
CDY24004 Canola cytosol, nucleus, plastid 3.47 27.06
CDY31063 Canola plasma membrane 17.67 26.96
CDY02184 Canola plasma membrane 18.58 26.91
CDY58691 Canola plasma membrane 18.43 26.64
CDY16831 Canola plasma membrane 18.28 26.42
CDX87193 Canola plasma membrane 18.13 26.32
CDX69511 Canola plasma membrane 17.82 25.93
CDY26444 Canola plastid 14.05 25.41
CDY60470 Canola plasma membrane 17.52 25.33
CDY20671 Canola extracellular, plasma membrane, vacuole 17.37 25.27
CDY43250 Canola plasma membrane 17.37 25.16
CDY58695 Canola extracellular 7.55 24.27
CDY02181 Canola endoplasmic reticulum, extracellular 7.4 23.79
CDY42842 Canola cytosol 4.38 23.77
CDY29033 Canola cytosol 6.19 22.53
CDY26445 Canola cytosol 5.29 20.71
CDX94950 Canola nucleus 17.07 19.82
CDX87194 Canola mitochondrion 5.59 17.7
CDY14723 Canola cytosol 8.46 17.61
CDX70627 Canola cytosol, nucleus, plasma membrane 18.43 14.22
Protein Annotations
MapMan:21.1.2.2GO:A0A078EG39EnsemblPlants:CDY00037ProteinID:CDY00037ProteinID:CDY00037.1InterPro:COBRA_pln
GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020GO:GO:0016043
GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00109521001PFAM:PD140986PFAM:PF04833
PANTHER:PTHR31052PANTHER:PTHR31052:SF3SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE114ESEG:seg
Description
BnaC09g02640D
Coordinates
chrLK031916:+:390247..392711
Molecular Weight (calculated)
73001.1 Da
IEP (calculated)
5.069
GRAVY (calculated)
-0.060
Length
662 amino acids
Sequence
(BLAST)
001: MGFLLPILLG VFLLITATPP SLSQLPPEID PPAPAPISPS ELCNGIFLSY TFILGRQIPP NDTTDQPYRF ESVLTVLNNG REELKEWRVF VGFQHHEILT
101: SATDAIIVNG TDLPAPVGNG TIFAGYPVSD LKTAIQTAGD LKQMTATIEL VGTQFMVAPP AIPLPSNISL VNDGWSCPEP TATPLSKRQI TTCCIRDPTF
201: EVNTTTITDK FLPRQPGDLT IMYDVIRAYD QNYLAEVTME NHNPLGRLDH WELSFDWMRE EFIQKMQGAY PTVVDATKCI FGPQSQIYTG LDFADVLTCE
301: RRPIIVDLPP TKAEDPVLGK IPSCCRNGTI LPRTMDPSKS ASVFTMQVAK MPPDFNRSAL SPPQNWRIKG TLNPDYSCGP PVRVSPTLYP DPSGMPTNKT
401: SFASWQIVCN ITHAKTETPK CCVSYSAFFN DSIIPCNTCA CGCVSETRRT CSAETPSLLI PPDALLVPFE NRTSLTVAWN ALKHKTIPNP MPCGDNCGVS
501: INWHIATDYR GGWTARITIF NWGEIDFPDW FLAVQMKKPA IRGFEKAYSF NASLLSIEGG VNNTIFMEGL PGLEYLVAER DELDPKKNLR VPGKQQSVIQ
601: FSKKLTPGIN VPERDGFPAK VIFNGEECLL PDVLPLPSGG RRNGFDTMVL LCMVIFVVAL VI
Best Arabidopsis Sequence Match ( AT5G49270.1 )
(BLAST)
001: MGVLLPIFFG VLLLFTVTPP SMSQLPPTIM VPAPAPAPIS PSDLCNGIFL SYDFILGRKI PPNDTADQPY RFESVLTVLN NGREELKEWR VFVGFQHNEI
101: LISATDALIV NGTELPALVG NGTIFGGYPV SDLKTAIQTA GDLKQMTAEI ELVGTQFMVA PPAVPLPSNI SLVNEGWLCP VPTLQSKREL TTCCIRDASI
201: IVNTTITTKF LPRQPGDLTI MYDVIRAYDQ NYLTEVTMEN HNPLGRLDHW ELSFDWMRDE FIQKMQGAYP TVVDATKCIF GPQSLIYTGL DFADVLTCER
301: RPIIIDLPPT KKDDSTLGNI PSCCRNGTIL PRIMDPSKSV SVFTMQVAKM PPDFNRSALF PPQNWRIKGT LNPDYSCGPP VRVTPTFYPD PSGMPTNKSS
401: FASWQIVCNI TQAKTEIPKC CVSFSAFFND SIIPCNTCAC GCVSETRRTC SAETPSLLIP PDALLLPFEN RTALTLAWNA LKHKTLPNPM PCGDNCGVSI
501: NWHMASDYRG GWTVRITIFN WGEIDFPNWF LAVQMKKPAL LGFEKAYSFN ASLLSVDGGV NNTIFMEGLP GLDYLVAEAD EKDPKKKNIR IPGKQQSVIQ
601: FSKKLTPGIN VAERDGFPAK VIFNGEECLL PDLLPMASGG RRNGAITVLS FITFYVAAFM VLL
Arabidopsis Description
COBL9COBRA-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ13]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.