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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010411.1-P Field mustard endoplasmic reticulum, golgi, vacuole 96.19 99.09
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 96.19 98.8
CDX89278 Canola extracellular, golgi, vacuole 89.6 92.31
CDY29275 Canola extracellular, plasma membrane, vacuole 89.6 92.03
AT4G27110.1 Thale cress extracellular 83.89 85.78
CDY09102 Canola cytosol 28.26 73.95
CDY36030 Canola vacuole 65.89 69.44
CDX82237 Canola endoplasmic reticulum, vacuole 67.06 68.56
CDY19626 Canola mitochondrion 40.26 66.75
VIT_10s0116g00620.t01 Wine grape extracellular 54.17 56.57
VIT_19s0177g00160.t01 Wine grape plasma membrane 53.73 56.03
CDY57659 Canola cytosol 12.45 55.56
KRH22248 Soybean golgi, vacuole 54.03 55.41
CDY55591 Canola plasma membrane 67.2 55.17
KRH27088 Soybean mitochondrion 54.17 55.14
PGSC0003DMT400002678 Potato vacuole 52.86 54.61
CDY43072 Canola plasma membrane 66.91 54.08
Solyc07g064200.2.1 Tomato extracellular, golgi, vacuole 48.61 53.98
GSMUA_Achr3P21560_001 Banana plasma membrane 51.54 53.66
PGSC0003DMT400037398 Potato vacuole 51.98 53.54
GSMUA_Achr4P33540_001 Banana vacuole 51.98 53.38
Solyc10g006450.2.1 Tomato golgi, plasma membrane, vacuole 51.98 52.91
KXG36369 Sorghum mitochondrion 51.54 52.3
Zm00001d021661_P001 Maize mitochondrion 51.68 52.06
PGSC0003DMT400002688 Potato cytosol 9.81 51.94
HORVU7Hr1G028350.1 Barley golgi, mitochondrion, plasma membrane 51.1 51.93
TraesCS7D01G136500.1 Wheat mitochondrion 50.81 51.48
TraesCS7B01G037700.1 Wheat mitochondrion 50.37 51.04
TraesCS7A01G136600.1 Wheat mitochondrion 50.22 50.89
Os06t0685100-00 Rice plasma membrane 50.81 50.81
CDY34424 Canola plasma membrane 44.95 46.59
CDY32210 Canola plasma membrane 44.95 46.52
CDY00037 Canola plasma membrane 43.92 45.32
CDY49611 Canola plasma membrane 43.92 45.32
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 42.9 44.06
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 42.02 43.03
CDY66895 Canola cytosol 2.49 29.82
CDX90983 Canola extracellular 17.72 27.82
CDX85277 Canola extracellular 17.42 27.29
CDY70289 Canola extracellular 15.81 27.2
CDX86358 Canola extracellular 17.13 26.83
CDY26444 Canola plastid 14.35 26.78
CDX85543 Canola extracellular, plasma membrane, vacuole 17.86 26.75
CDX69511 Canola plasma membrane 17.72 26.59
CDY31063 Canola plasma membrane 16.69 26.27
CDX87193 Canola plasma membrane 17.28 25.88
CDY02184 Canola plasma membrane 17.13 25.6
CDY16831 Canola plasma membrane 17.13 25.55
CDX93481 Canola plasma membrane 16.25 25.28
CDY58691 Canola plasma membrane 16.84 25.11
CDY60470 Canola plasma membrane 16.11 24.02
CDY43250 Canola plasma membrane 15.96 23.85
CDY20671 Canola extracellular, plasma membrane, vacuole 15.81 23.74
CDY58695 Canola extracellular 7.03 23.3
CDY42842 Canola cytosol 4.1 22.95
CDY02181 Canola endoplasmic reticulum, extracellular 6.88 22.82
CDY26445 Canola cytosol 5.12 20.71
CDY24004 Canola cytosol, nucleus, plastid 2.49 20.0
CDX94950 Canola nucleus 15.96 19.12
CDY29033 Canola cytosol 4.98 18.68
CDX87194 Canola mitochondrion 5.71 18.66
CDY14723 Canola cytosol 7.61 16.35
CDX70627 Canola cytosol, nucleus, plasma membrane 18.3 14.57
Protein Annotations
MapMan:21.1.2.2GO:A0A078FPL7UniProt:A0A078FPL7EnsemblPlants:CDY14283ProteinID:CDY14283ProteinID:CDY14283.1
InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00078875001
PFAM:PD140986PFAM:PF04833PANTHER:PTHR31052PANTHER:PTHR31052:SF2SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE02D3SEG:seg::::
Description
BnaA08g14140DBnaA08g14140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPL7]
Coordinates
chrLK032041:+:659273..662001
Molecular Weight (calculated)
76000.3 Da
IEP (calculated)
9.314
GRAVY (calculated)
-0.321
Length
683 amino acids
Sequence
(BLAST)
001: MKKIRYVHLN LLLLLLPIIN LLLFPTPSLA QDYGEDAEKK DTPPPGLARC NGVYMSYSSG GREKLYPRTK NVTAQAWSFK ATAMIVNTGT EEVKGWEMFV
101: GYRHREIIVS ATGAVSSDGD FPYDASNGTT FIGSPNTDLK TSIETAGDYT QISTNIEITG TLFGGRGTAT PLPRTIKLVN DGWECPAANS KGGTMQVCCK
201: RNPKFKAKEK KKTKFMRRRH GDLNIIYDVL QAYTSNYMAQ ASHQSISLIY ITRPVGLVTI DNDSPLGRLD HWNLTWEWMR GEFIHSLRGA YSAEKNPSEC
301: LHSKAGQFYG DLDFSQVATC QKKPIIKDLP AERKDDKLLG KLPFCCKNGT LLPAHMDSSK SRAIFQLQVY KVPPDQNRTA FFPPQHWKID GIVNPQYKCG
401: TPIRVDATGF PDPSGLQATT YAFASWQVVC NITKPKPKAA RCCVSYSAFY NDSAIPCNTC ACGCGDIDTD TCNANARPLL LPPDSLLVPF ENRTLKAKVW
501: ARRKHMAVPK KLPCPDNCGI SLNWHVNSDY ADGWSARVTL FNWGANAVED WFAAVDLGKA GLGYENVYSF NGTRVPPKNQ TIFFQGVRGM NFLIGLTNGS
601: NPARDPKVPG KMQSVISFKK HLGSLNIPRG DGFPKRVFFN GEECELPKYF PKKSYGERLS CIRFLPSILL VITTFLVIIN DRF
Best Arabidopsis Sequence Match ( AT4G27110.1 )
(BLAST)
001: MKKLRYVHLN LLLLLLPLIN LQFPTLSLAQ DYDEPKKDDT PPPGLARCNG VYMSYSSGGR EKLYPRTTNA TAQAWSFKST AMIVNTGIEE VKGWQMFVGF
101: HHREIIVSAT GAVSSDGDFP VDATNGTTFI GSQNTDLKTS ILTAGDYTQI STNIEITGTV FGGKGTATPM PKSIKLTNDG WQCPAATSKG GTMQVCCKRN
201: PKFKAKEKVK TKFMPRQHGD LNIIYDVLQA YASSYMAQVT IDNTSPLGRL DHWNLTWEWM RGEFIHSMRG AYAAEKNTLE CLSSKAGQFY GDLDFSQVAN
301: CQKKPIIKDL PAERKDDNVT GKLPFCCKNG TLLPTHMDPS KSKAIFQLQV YKVPPDQNRT AFFPPRNWKI DGIVNPTYKC GPPIRVDATP FPDPSGLQAT
401: TYAIASWQVI CNITKPKPQA ARCCVSFSAF YNDSAIPCNT CACGCKDIDT DTCNANARQL LLPTDTLLVP FDNRTLKAKV WAKQKHMAYP KKLPCPDNCG
501: ISLNWHLNSD YGNGWSARVT LFNWGNNAVE DWFGALDLGK AGLGYENIYS FNGSRVPPKN QTIFFQGLPG MNYLIGITNG TNPARDPQIP GKMQSVISFK
601: KKNLGSLNII GGDGFPKRVF FNGEECELPK YFPKKSSGMR LSGIRFLPSI LLAITTFHAI TDRLLTGV
Arabidopsis Description
COBL11COBRA-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9T045]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.