Factsheet for Zm00001d021661_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36369	Sorghum	mitochondrion	92.18	92.87
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	79.65	80.36
Os06t0685100-00	Rice	plasma membrane	80.38	79.8
TraesCS7A01G136600.1	Wheat	mitochondrion	79.2	79.67
TraesCS7D01G136500.1	Wheat	mitochondrion	79.2	79.67
TraesCS7B01G037700.1	Wheat	mitochondrion	78.76	79.23
GSMUA_Achr3P21560_001	Banana	plasma membrane	62.83	64.94
GSMUA_Achr4P33540_001	Banana	vacuole	59.88	61.05
VIT_19s0177g00160.t01	Wine grape	plasma membrane	54.42	56.34
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	30.97	55.26
CDY36030	Canola	vacuole	52.8	55.25
VIT_10s0116g00620.t01	Wine grape	extracellular	53.24	55.2
CDX82237	Canola	endoplasmic reticulum, vacuole	53.54	54.34
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	53.69	54.17
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	53.24	54.04
CDY19626	Canola	mitochondrion	32.6	53.64
Bra023941.1-P	Field mustard	plasma membrane	53.1	53.57
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	51.03	52.99
CDX89278	Canola	extracellular, golgi, vacuole	51.62	52.79
PGSC0003DMT400002678	Potato	vacuole	51.33	52.65
CDY29275	Canola	extracellular, plasma membrane, vacuole	51.62	52.63
CDX97377	Canola	endoplasmic reticulum, golgi, vacuole	51.62	52.63
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	47.64	52.52
PGSC0003DMT400037398	Potato	vacuole	51.03	52.19
AT4G27110.1	Thale cress	extracellular	51.33	52.1
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	50.88	52.04
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	51.18	51.71
CDY14283	Canola	endoplasmic reticulum, plasma membrane, vacuole	52.06	51.68
KRH27599	Soybean	extracellular	49.56	51.61
CDY09102	Canola	cytosol	19.62	50.96
KRH77883	Soybean	extracellular, plasma membrane, vacuole	44.99	50.92
KRH22248	Soybean	golgi, vacuole	49.85	50.75
KRH27088	Soybean	mitochondrion	49.41	49.93
Bra020151.1-P	Field mustard	cytosol	18.73	49.03
Zm00001d028826_P001	Maize	plasma membrane	46.76	47.53
PGSC0003DMT400005270	Potato	cytosol	50.0	47.35
Solyc02g080250.1.1	Tomato	cytosol	23.45	46.49
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	43.36	44.95
PGSC0003DMT400002688	Potato	cytosol	8.41	44.19
CDY57659	Canola	cytosol	9.88	43.79
CDY55591	Canola	plasma membrane	53.24	43.39
CDY43072	Canola	plasma membrane	52.95	42.49
Zm00001d031479_P001	Maize	cytosol, mitochondrion	7.37	30.49
Zm00001d013256_P001	Maize	extracellular	18.14	27.39
Zm00001d034049_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	17.85	26.77
Zm00001d047276_P001	Maize	plasma membrane	17.7	26.67
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	17.55	26.62
Zm00001d022081_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	16.52	24.35
Zm00001d002803_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	15.49	24.08

Protein Annotations

EntrezGene:100037828	MapMan:21.1.2.2	UniProt:A1DZD6	InterPro:COBRA_pln	EMBL:EF078700	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0031225	GO:GO:0040007	ProteinID:ONM57941.1	ProteinID:ONM57942.1	PFAM:PD140986	PFAM:PF04833
PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000EA3B02	EnsemblPlantsGene:Zm00001d021661
EnsemblPlants:Zm00001d021661_P001	EnsemblPlants:Zm00001d021661_T001	SEG:seg	:	:	:

Description

Brittle stalk-2-like protein 5

Coordinates

chr7:-:159417294..159420277

Molecular Weight (calculated)

75173.4 Da

IEP (calculated)

8.909

GRAVY (calculated)

-0.312

Length

678 amino acids

Sequence
(BLAST)

001: MVMAAPVPLR RRRALLVVAT LLAVVTAAMA QDYKDGGGDD YEEDEKKKPQ FKAQEACNGV FLTYTFMERA KEYPHLKKAA AQPYAFKATA TVLNTMTEDL
101: KAWQMFVGFQ HKEILVSVGG AVLLDGSDLP ANVSGGATFA GYPMADLLNS IETAGEPSLI ESKIEITGTQ FGVKAPGKPM PKTIKLTNPV GFRCPAPNHK
201: DSVMYVCCVK DRKFKAKKAN STRYQTRRKA DLTFAYDVLQ ANTNNYQVQV TIDNWSPISR LDNWNLTWEW KRGEFIYSMK GAYTLLKEGP ACIYSPAAGY
301: YKDMDFTPVY NCEKRPVIVD LPPEREKDDA VGNLPFCCKN GTLLPPTMDP SKSRAMFQMQ VYKLPPDLNR TALYPPQNWK ISGKLNPQYA CGPPVRVSPQ
401: EFPDPTGLMS TTPAVASWQV ACNITRPKKR ASKCCVSFSA YYNDSVVPCN TCACGCGDDT ATCDPDKRAM LLPPEALLVP FDNRSAKARA WAKIKHWRVP
501: NPMPCSDNCG VSINWHVINN YKSGWSARMT IFNWQDYTFK DWFAAVTMGS HFSGYENVYS FNGTRMGAPF NNTIFMQGVP GLAYLEPITD AKTTSEPRLP
601: GKQQSVISFT RKDAPNVNIP RGEGFPKRIY FDGEECALPD RIPKVSSARR RAGTASLGQI AMAAALVMIV ALVDSLCL

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.