CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77883	Soybean	extracellular, plasma membrane, vacuole	82.03	89.15
GSMUA_Achr3P21560_001	Banana	plasma membrane	55.91	55.49
GSMUA_Achr4P33540_001	Banana	vacuole	55.76	54.59
KRH27088	Soybean	mitochondrion	53.92	52.31
KRH22248	Soybean	golgi, vacuole	52.69	51.5
KXG36369	Sorghum	mitochondrion	53.0	51.26
KRH02312	Soybean	endoplasmic reticulum, extracellular	50.54	51.09
KRH50776	Soybean	endoplasmic reticulum, vacuole	50.38	51.01
TraesCS7D01G136500.1	Wheat	mitochondrion	52.38	50.59
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	52.07	50.45
TraesCS7A01G136600.1	Wheat	mitochondrion	51.77	50.0
TraesCS7B01G037700.1	Wheat	mitochondrion	51.77	50.0
PGSC0003DMT400005270	Potato	cytosol	54.84	49.86
Os06t0685100-00	Rice	plasma membrane	52.23	49.78
Solyc02g080250.1.1	Tomato	cytosol	26.11	49.71
Zm00001d021661_P001	Maize	mitochondrion	51.61	49.56
KRH37033	Soybean	extracellular	47.77	47.85
KRH72178	Soybean	mitochondrion	16.74	29.54
KRH01360	Soybean	extracellular, golgi, plasma membrane	19.97	29.02
KRH45086	Soybean	plasma membrane	19.2	29.0
KRH54735	Soybean	endoplasmic reticulum	20.28	28.95
KRH45084	Soybean	extracellular, golgi, plasma membrane	19.82	28.79
KRG93686	Soybean	extracellular, plasma membrane, vacuole	19.05	28.77
KRH01361	Soybean	extracellular, plasma membrane, vacuole	19.05	28.77
KRH63181	Soybean	endoplasmic reticulum	19.97	28.51
KRH01357	Soybean	nucleus	18.28	28.33
KRG93684	Soybean	extracellular, vacuole	19.66	28.19
KRH63180	Soybean	plasma membrane	19.66	27.95
KRH03165	Soybean	extracellular	19.35	27.75
KRH18352	Soybean	plasma membrane	19.51	27.73
KRH54737	Soybean	plasma membrane	19.35	27.51
KRH51434	Soybean	endoplasmic reticulum, plasma membrane, vacuole	17.36	25.39
KRH60734	Soybean	plasma membrane	17.36	25.28
KRH18350	Soybean	cytosol	6.3	23.03
KRH56778	Soybean	extracellular	7.22	22.49

Protein Annotations

EntrezGene:100799716	MapMan:21.1.2.2	EMBL:ACUP02006729	InterPro:COBRA_pln	EnsemblPlantsGene:GLYMA_11G003300	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0031225	GO:GO:0040007	UniProt:I1LFR3	EnsemblPlants:KRH27599	ProteinID:KRH27599	ProteinID:KRH27599.1
PFAM:PD140986	PFAM:PF04833	PANTHER:PTHR31052	PANTHER:PTHR31052:SF11	SignalP:SignalP-noTM	UniParc:UPI000233C552
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:219372..222023

Molecular Weight (calculated)

72460.4 Da

IEP (calculated)

8.767

GRAVY (calculated)

-0.182

Length

651 amino acids

Sequence
(BLAST)

001: MPSPLLSLSL VLLFLISCGN IHECEAQDTE ALPPAAETCN GVFISYDFLT RRKEFPRVKN ATAQSWAFNS TATVLNTGKD VVKAWRLFIG FQHDEILISA
101: SGGNLIDGTD FPALVGNGTT FVGSSVPDLD SSINTAQDLT QISAMIQLIG TQFGVRPPTI PMPKTIKLVN DGYKCPLPTT RKGSMYACCK KDPKFKAVLR
201: KTKFLPRQQG DLTISYDVNQ VYENNYMVEV TMENNHLLGR LDHWNLTWEW TRGEFIYSMK GAFTRVIEYS GCIYGAAGQY YKDMDFSKVV NCQKNPIISD
301: LPPEKANDTE IGKIPHCCKN GTLLPILMDP SKSKSVFQMQ VFKVPPDLNK TAIFPPEKWK ITGILNPEYR CGAPIRVDPA QSQDPRGLEA TVIAISSWQI
401: VCNITKPTKR STRCCVSFSA YYNESIVPCN TCACGCDENN RRCNPNSPAM LLPPEALLVP FENRTKKTVA WAKLKHFKVP TKLPCADNCG VSINWHVVSD
501: FKGGWSARIT MFNWQHTNFE NWFTALQFKK KTALGYEKVY SFNGTFLPKL NHTIFLQGTQ GSNFLLALDN GTNPKVPGKA QSVLSFTKKF APGMKIAKGD
601: GFPSRVFFNG EECSIPTRFP VGNGNQHNAD SLNLHLLLAL VLAFTMSIIL Y

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.