Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51434 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 93.51 | 93.93 |
| VIT_03s0038g01430.t01 | Wine grape | mitochondrion | 24.16 | 65.45 |
| VIT_03s0038g01420.t01 | Wine grape | extracellular, plasma membrane | 32.21 | 57.6 |
| PGSC0003DMT400004139 | Potato | extracellular | 25.28 | 54.85 |
| Solyc01g111050.2.1 | Tomato | cytosol | 56.15 | 53.52 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 42.95 | 42.86 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 42.73 | 42.63 |
| KRH72178 | Soybean | mitochondrion | 35.12 | 42.55 |
| KRH63181 | Soybean | endoplasmic reticulum | 43.18 | 42.32 |
| KRH54735 | Soybean | endoplasmic reticulum | 42.73 | 41.89 |
| KRH03165 | Soybean | extracellular | 42.51 | 41.85 |
| KRG93686 | Soybean | extracellular, plasma membrane, vacuole | 40.27 | 41.76 |
| KRH01357 | Soybean | nucleus | 38.48 | 40.95 |
| KRH45086 | Soybean | plasma membrane | 39.37 | 40.84 |
| KRH01361 | Soybean | extracellular, plasma membrane, vacuole | 39.15 | 40.6 |
| KRG93684 | Soybean | extracellular, vacuole | 40.94 | 40.31 |
| KRH18352 | Soybean | plasma membrane | 40.27 | 39.3 |
| KRH18350 | Soybean | cytosol | 15.44 | 38.76 |
| KRH54737 | Soybean | plasma membrane | 38.7 | 37.77 |
| KRH63180 | Soybean | plasma membrane | 38.48 | 37.55 |
| KRH56778 | Soybean | extracellular | 17.0 | 36.36 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 26.17 | 18.17 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 25.95 | 18.04 |
| KRH22248 | Soybean | golgi, vacuole | 26.85 | 18.02 |
| KRH77883 | Soybean | extracellular, plasma membrane, vacuole | 23.94 | 17.86 |
| KRH37033 | Soybean | extracellular | 25.28 | 17.38 |
| KRH27599 | Soybean | extracellular | 25.28 | 17.36 |
| KRH27088 | Soybean | mitochondrion | 25.73 | 17.14 |
Protein Annotations
| EntrezGene:100305816 | MapMan:21.1.2.2 | UniProt:A0A0R0K1M1 | EMBL:ACUP02002137 | InterPro:COBRA_pln | EnsemblPlantsGene:GLYMA_04G006100 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlants:KRH60734 | ProteinID:KRH60734 |
| ProteinID:KRH60734.1 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF9 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0003DE92A9 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:-:479834..482672
Molecular Weight (calculated)
50243.6 Da
IEP (calculated)
6.641
GRAVY (calculated)
-0.185
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNVHRVHS PTLKSIILLL ALCTLSDCYD PLDPNGNISV TFDIFQRTPD NGYLARVTLQ NYYQYRHVDK PGWKLGWTWA NNEVIWSMSG AIATDRGNCS
101: SYSGSQMPHS CKKDPTIVDL SLDASQNRSE HCCRGGLLSP WSIDPFYAFS SFELEVRNVG DNPLGQAPIN LTLMAPGPGY TCSPLLDTDL SVSSDFGGLR
201: QVPVLRTWKS TCAYSSFLAN TIPVCCVSLS SFYNPAITSC RNCSCGCREA DKSTATCIRS SSLSRSNEDN TIDEMIECTD HMCPVRVHWH FKNNYMNQWR
301: VKLTISNYNY NRNYSNWNVL VQHPGFTQKA RTYSFNSTKL PTLGLQDGVS LFWGIDYYNN ELVHSDKDGV GLVTTEILLD KDPNSFTVSN GWAFPRRIYF
401: NGENCEMPLP DTFPMLPNGG SILRATYCGF SLLYILLFLA LLLILWF
101: SYSGSQMPHS CKKDPTIVDL SLDASQNRSE HCCRGGLLSP WSIDPFYAFS SFELEVRNVG DNPLGQAPIN LTLMAPGPGY TCSPLLDTDL SVSSDFGGLR
201: QVPVLRTWKS TCAYSSFLAN TIPVCCVSLS SFYNPAITSC RNCSCGCREA DKSTATCIRS SSLSRSNEDN TIDEMIECTD HMCPVRVHWH FKNNYMNQWR
301: VKLTISNYNY NRNYSNWNVL VQHPGFTQKA RTYSFNSTKL PTLGLQDGVS LFWGIDYYNN ELVHSDKDGV GLVTTEILLD KDPNSFTVSN GWAFPRRIYF
401: NGENCEMPLP DTFPMLPNGG SILRATYCGF SLLYILLFLA LLLILWF
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.