CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27599	Soybean	extracellular	89.15	82.03
GSMUA_Achr3P21560_001	Banana	plasma membrane	54.92	50.15
GSMUA_Achr4P33540_001	Banana	vacuole	54.26	48.87
KRH27088	Soybean	mitochondrion	52.59	46.94
Solyc02g080250.1.1	Tomato	cytosol	26.71	46.78
KRH22248	Soybean	golgi, vacuole	51.92	46.7
KXG36369	Sorghum	mitochondrion	51.92	46.21
KRH50776	Soybean	endoplasmic reticulum, vacuole	49.08	45.72
KRH02312	Soybean	endoplasmic reticulum, extracellular	49.08	45.65
PGSC0003DMT400005270	Potato	cytosol	54.42	45.53
TraesCS7D01G136500.1	Wheat	mitochondrion	51.09	45.4
Os06t0685100-00	Rice	plasma membrane	51.59	45.24
Zm00001d021661_P001	Maize	mitochondrion	50.92	44.99
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	50.42	44.94
TraesCS7B01G037700.1	Wheat	mitochondrion	50.25	44.66
TraesCS7A01G136600.1	Wheat	mitochondrion	50.25	44.66
KRH37033	Soybean	extracellular	48.25	44.46
KRH72178	Soybean	mitochondrion	16.86	27.37
KRH63180	Soybean	plasma membrane	20.87	27.29
KRG93686	Soybean	extracellular, plasma membrane, vacuole	19.53	27.15
KRH45086	Soybean	plasma membrane	19.37	26.91
KRH01360	Soybean	extracellular, golgi, plasma membrane	20.03	26.79
KRH54735	Soybean	endoplasmic reticulum	20.37	26.75
KRH01361	Soybean	extracellular, plasma membrane, vacuole	19.2	26.68
KRH54737	Soybean	plasma membrane	20.37	26.64
KRH03165	Soybean	extracellular	20.03	26.43
KRH45084	Soybean	extracellular, golgi, plasma membrane	19.7	26.34
KRH63181	Soybean	endoplasmic reticulum	20.03	26.32
KRG93684	Soybean	extracellular, vacuole	19.87	26.21
KRH01357	Soybean	nucleus	18.36	26.19
KRH18352	Soybean	plasma membrane	19.37	25.33
KRH51434	Soybean	endoplasmic reticulum, plasma membrane, vacuole	17.86	24.04
KRH60734	Soybean	plasma membrane	17.86	23.94
KRH18350	Soybean	cytosol	6.51	21.91
KRH56778	Soybean	extracellular	7.51	21.53

Protein Annotations

MapMan:21.1.2.2	EMBL:ACUP02000685	InterPro:COBRA_pln	EnsemblPlantsGene:GLYMA_01G240200	GO:GO:0005575	GO:GO:0008150
GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225
GO:GO:0040007	UniProt:I1JAV8	EnsemblPlants:KRH77883	ProteinID:KRH77883	ProteinID:KRH77883.1	PFAM:PD140986
PFAM:PF04833	PANTHER:PTHR31052	PANTHER:PTHR31052:SF11	SignalP:SignalP-noTM	UniParc:UPI000295BC91	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:56415665..56418191

Molecular Weight (calculated)

67126.9 Da

IEP (calculated)

8.674

GRAVY (calculated)

-0.214

Length

599 amino acids

Sequence
(BLAST)

001: MTSALPYLSL SLVLLFLISS GIHECEGQDP EALPPAAETC TGVFISYDFL TRTKEFPRVK KATAQPWAFN ATATVLNTGN GITFVGSSVP DLDSSINTAQ
101: DLSQISAMIQ LIGTQFRVNP PTIPMPKTIK LVTDGYNCPQ PTTRKDSMHA CCKKDPKFKA TLRKTKFFPR QKGDLTISYD VNQVYENNYM VEVTMENNHL
201: LGRLDHWNLT WEWTRGEFIY SMKGAFTCVI EYSDCIYGAA GQYYKDMDFS KVVNCQKNPI VSDLPPEKAN DTEIGKIPHC CKNGTILPIH MDPSKSKSVF
301: QMQVFKVPPD LNKTAIYPPE KWKIMGILNP DYKNPRGLEA TVIAISSWQI VCNITKPTKR STRCCVSFSA YYNESVVPCN PCACGCDDNT RRCNPNSQAM
401: LLPPEALLIP FENRTKKTVD WAKLKHFNVP TKLPCADNCG VSINWHVVWD FKGGWSARIT LFNWQHTNFE NWFTALQFKK KASLGFEIVY SFNGTFLPTL
501: NHTIFLQGIQ GSNFLIGLDN GTNPKVPGKS QSVVSFTKKF TPGIKIAKGD GFPSRVFFTG EECSIPTGFP ARNRNQHNVD LVNLLLALVL AFTMSKILY

Best Arabidopsis Sequence Match ( AT3G16860.1 )
(BLAST)

001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI

Arabidopsis Description

COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.