Factsheet for Solyc02g080250.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
plasma membrane 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005270	Potato	cytosol	85.09	40.64
KRH77883	Soybean	extracellular, plasma membrane, vacuole	46.78	26.71
KRH27599	Soybean	extracellular	49.71	26.11
GSMUA_Achr4P33540_001	Banana	vacuole	50.58	26.02
Solyc01g065530.2.1	Tomato	nucleus, plastid	47.66	25.15
GSMUA_Achr3P21560_001	Banana	plasma membrane	47.95	25.0
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	48.25	24.59
Solyc09g075540.1.1	Tomato	plasma membrane	46.2	24.23
KXG36369	Sorghum	mitochondrion	47.37	24.07
TraesCS7A01G136600.1	Wheat	mitochondrion	46.78	23.74
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	42.4	23.58
Zm00001d021661_P001	Maize	mitochondrion	46.49	23.45
Os06t0685100-00	Rice	plasma membrane	46.78	23.43
TraesCS7D01G136500.1	Wheat	mitochondrion	45.91	23.29
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	45.61	23.21
TraesCS7B01G037700.1	Wheat	mitochondrion	45.32	23.0
Solyc03g070440.2.1	Tomato	extracellular	24.85	19.72
Solyc02g064790.1.1	Tomato	extracellular, vacuole	3.8	18.84
Solyc03g114910.2.1	Tomato	extracellular, plasma membrane, vacuole	25.15	18.78
Solyc02g065770.2.1	Tomato	extracellular	24.27	18.69
Solyc03g114890.2.1	Tomato	extracellular	21.64	18.45
Solyc03g114900.2.1	Tomato	extracellular	23.98	18.34
Solyc02g089120.2.1	Tomato	extracellular	23.98	18.34
Solyc02g089130.2.1	Tomato	extracellular	23.1	18.2
Solyc01g103860.2.1	Tomato	cytosol	21.64	17.49
Solyc03g070450.1.1	Tomato	extracellular, vacuole	10.53	16.74
Solyc03g114880.1.1	Tomato	cytosol, extracellular, vacuole	15.2	16.3
Solyc01g111050.2.1	Tomato	cytosol	20.18	14.71
Solyc02g080240.1.1	Tomato	extracellular	12.28	10.91
Solyc03g070460.1.1	Tomato	cytosol	2.34	6.9

Protein Annotations

EnsemblPlants:Solyc02g080250.1.1	EnsemblPlantsGene:Solyc02g080250.1	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	PFAM:PD140986	SEG:seg	UniParc:UPI0002768E2C	UniProt:K4B9P6
MapMan:21.1.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:44516448..44517816

Molecular Weight (calculated)

37819.9 Da

IEP (calculated)

10.042

GRAVY (calculated)

-0.299

Length

342 amino acids

Sequence
(BLAST)

001: MKKIKNCLNI DGIGSSPLNL TALYPPERWK IVGLLNPDYK CGQALRVDDK GRGSRCPVSE SGGPGGRRAP WPGGPGGRRR PRADAIASWQ IVCNITKPKD
101: KANRCCVSYS AYYNDSAIPC NTCACGCDNS AKCSQHAPGL LLPPEALLVP FANRREKSLY WAKLKHYRVP KQLPCGDNCG VTINWHIDSN YKSGWTARIT
201: LFNWGAVNFV DWFVGIQFKK TGSGFAQAFS FNGTLLRNIN DTIFLKGLPG LNYLMAEVDG RKPGDPRVPG KQQSVLRFNK KHLKGIDILK GDGFPTKLLF
301: NGEECALPTH LLAADGRKWH AKSWVIAMIT LLTFLLMLKD LQ

Best Arabidopsis Sequence Match ( AT3G16860.1 )
(BLAST)

001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI

Arabidopsis Description

COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.