Factsheet for Solyc02g089130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003723	Potato	extracellular	97.0	97.0
Solyc03g070440.2.1	Tomato	extracellular	85.25	85.85
Solyc03g114900.2.1	Tomato	extracellular	76.04	73.83
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	74.42	72.26
GSMUA_Achr4P14440_001	Banana	plasma membrane	72.58	68.78
EER94687	Sorghum	extracellular	70.28	68.39
EER99679	Sorghum	plasma membrane	69.82	67.94
TraesCS5D01G107900.1	Wheat	extracellular	70.05	67.71
TraesCS5A01G095200.1	Wheat	extracellular	70.05	67.71
Zm00001d047276_P001	Maize	plasma membrane	70.05	67.56
TraesCS5B01G101400.1	Wheat	extracellular	70.05	67.56
TraesCS2D01G182400.1	Wheat	plasma membrane	69.35	67.34
TraesCS2A01G175000.1	Wheat	plasma membrane	69.59	67.26
TraesCS2B01G201400.1	Wheat	plasma membrane	69.35	67.19
HORVU3Hr1G007580.2	Barley	extracellular	57.14	66.13
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	67.97	66.0
Solyc02g065770.2.1	Tomato	extracellular	67.51	65.99
Os03t0416200-01	Rice	extracellular, golgi, plasma membrane	70.74	65.6
Solyc02g089120.2.1	Tomato	extracellular	67.05	65.1
Solyc03g114890.2.1	Tomato	extracellular	60.14	65.09
HORVU3Hr1G009960.1	Barley	plastid	32.26	64.22
Os07t0604400-00	Rice	extracellular	66.59	64.08
HORVU2Hr1G033060.13	Barley	mitochondrion	64.06	62.19
TraesCS3D01G047900.1	Wheat	plastid	35.02	61.04
TraesCSU01G047200.1	Wheat	plastid	32.26	60.34
Solyc03g114910.2.1	Tomato	extracellular, plasma membrane, vacuole	63.59	60.26
HORVU0Hr1G004650.3	Barley	mitochondrion	55.76	58.31
Solyc03g070460.1.1	Tomato	cytosol	15.44	57.76
HORVU2Hr1G033080.1	Barley	extracellular	22.81	53.8
Solyc01g103860.2.1	Tomato	cytosol	50.0	51.3
Solyc03g114880.1.1	Tomato	cytosol, extracellular, vacuole	36.18	49.22
Solyc02g064790.1.1	Tomato	extracellular, vacuole	6.91	43.48
Solyc01g111050.2.1	Tomato	cytosol	43.32	40.09
Solyc03g070450.1.1	Tomato	extracellular, vacuole	15.44	31.16
Solyc02g080250.1.1	Tomato	cytosol	18.2	23.1
Solyc09g075540.1.1	Tomato	plasma membrane	29.95	19.94
Solyc01g065530.2.1	Tomato	nucleus, plastid	29.26	19.6
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	29.26	18.93
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	24.19	17.07
Solyc02g080240.1.1	Tomato	extracellular	12.9	14.55

Protein Annotations

MapMan:21.1.2.2	InterPro:COBRA_pln	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
UniProt:K4BC67	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	PANTHER:PTHR31673	PANTHER:PTHR31673:SF2
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g089130.2	EnsemblPlants:Solyc02g089130.2.1	TMHMM:TMhelix	UniParc:UPI0002768A7C	SEG:seg

Description

No Description!

Coordinates

chr2:-:51011783..51013880

Molecular Weight (calculated)

49030.2 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.167

Length

434 amino acids

Sequence
(BLAST)

001: MRGLIVVAGF LIIALIPHTV AFDPLDPNGN ITIKWDVMSW TPDGYVATVT MNNFQMYRHI MTPGWTLGWT WAKKEVIWSM VGAQTTEQGD CSKFKGNIPH
101: CCKKNPTVVD LLPGTPYNQQ FTNCCKGGVL ASWGQDPQSS VSAFQVSVGQ AGTTNKTVKL PKNFTLLGPG PGYTCGPAKI VPPTKFFTPD LRRKTQALMT
201: WNVTCTYSQF LARKHPSCCV SMSSFYNETI TSCPSCACGC ENRNKCIKSD SKLLSVVGVN TPRKDNAPLI QCTHHMCPIR VHWHVKLNYK DYWRVKLTVT
301: NFNYRINYTQ WTLVVQHPNL NNVTQVFSFD YKPLVPYQSV NDTGMFYGMK FYNDLLMEAG PSGTVQSEVL LQKDKETFSF KQGWAFPRKV YFNGDECMLP
401: PPDTYPYLPN FAHHSPTAFT TSLFSLFFLF ILLF

Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)

001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W

Arabidopsis Description

COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.