Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g070440.2.1 Tomato extracellular 66.08 61.48
Solyc03g114880.1.1 Tomato cytosol, extracellular, vacuole 48.13 60.5
Solyc02g089130.2.1 Tomato extracellular 65.09 60.14
Solyc02g065770.2.1 Tomato extracellular 66.33 59.91
Solyc02g089120.2.1 Tomato extracellular 65.34 58.61
Solyc03g114900.2.1 Tomato extracellular 64.59 57.94
Solyc03g114910.2.1 Tomato extracellular, plasma membrane, vacuole 60.85 53.28
Solyc03g070460.1.1 Tomato cytosol 14.21 49.14
Solyc01g103860.2.1 Tomato cytosol 47.63 45.15
Solyc02g064790.1.1 Tomato extracellular, vacuole 7.73 44.93
Solyc01g111050.2.1 Tomato cytosol 45.39 38.81
Solyc03g070450.1.1 Tomato extracellular, vacuole 15.96 29.77
Solyc02g080250.1.1 Tomato cytosol 18.45 21.64
Solyc09g075540.1.1 Tomato plasma membrane 29.93 18.4
Solyc01g065530.2.1 Tomato nucleus, plastid 28.93 17.9
Solyc10g006450.2.1 Tomato golgi, plasma membrane, vacuole 28.93 17.29
Solyc07g064200.2.1 Tomato extracellular, golgi, vacuole 25.69 16.75
Solyc02g080240.1.1 Tomato extracellular 13.47 14.03
Protein Annotations
EnsemblPlants:Solyc03g114890.2.1EnsemblPlantsGene:Solyc03g114890.2GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
PANTHER:PTHR31673PANTHER:PTHR31673:SF2PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122SignalP:SignalP-noTM
UniParc:UPI00027685A7UniProt:K4BKZ1MapMan:21.1.2.2:::
Description
No Description!
Coordinates
chr3:+:64770618..64772462
Molecular Weight (calculated)
44468.8 Da
IEP (calculated)
9.800
GRAVY (calculated)
-0.183
Length
401 amino acids
Sequence
(BLAST)
001: MSLNSYTIVF LFFVLCSRSA AYDALDPNGN ITIKWDVISW TPDGYVAVVT MNNFQMYRPI VSPGWTLGWT WAKNEVIWAM MGAQATDQGD CSKFRGNIPH
101: SCEKKPAIVD LLPNTPYNQQ IANCCKGGVI ASMGKDSSAA LSAFQIAVGA AGTTNRTVKL PKNFTFVAPG GGYTCGPAKI IRPTRFITPD GRRITQAMMT
201: WRVVCTYSQF IASPKPTCCV SLSSFHNASV TPCPSCSCGC RKSSNCVMKG VNKPVLQCTK HMCPVNVHWH VKSNYNKYWN VKMTITNFNY RFNYTHWTLV
301: VQHPNLNKAT KVSSFVYKPL MPNLSTNDTA LFYGRKAYND VLMQAGPKGN VHSDLTLEKD RKTLALKKGW AFPRRVYFNG NPCVMPSPES CPYLPNSAGA
401: K
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.