Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082702 | Potato | extracellular | 55.45 | 96.37 |
| PGSC0003DMT400002674 | Potato | plasma membrane | 96.98 | 96.31 |
| Solyc02g089130.2.1 | Tomato | extracellular | 85.85 | 85.25 |
| Solyc03g114900.2.1 | Tomato | extracellular | 76.8 | 74.05 |
| GSMUA_Achr4P03210_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 74.48 | 71.81 |
| EER94687 | Sorghum | extracellular | 71.93 | 69.51 |
| GSMUA_Achr4P14440_001 | Banana | plasma membrane | 73.78 | 69.43 |
| Zm00001d047276_P001 | Maize | plasma membrane | 71.46 | 68.44 |
| EER99679 | Sorghum | plasma membrane | 70.77 | 68.39 |
| TraesCS5D01G107900.1 | Wheat | extracellular | 70.53 | 67.71 |
| TraesCS5A01G095200.1 | Wheat | extracellular | 70.3 | 67.48 |
| TraesCS2D01G182400.1 | Wheat | plasma membrane | 69.84 | 67.34 |
| TraesCS5B01G101400.1 | Wheat | extracellular | 70.3 | 67.33 |
| TraesCS2A01G175000.1 | Wheat | plasma membrane | 70.07 | 67.26 |
| HORVU3Hr1G007580.2 | Barley | extracellular | 58.47 | 67.2 |
| TraesCS2B01G201400.1 | Wheat | plasma membrane | 69.61 | 66.96 |
| Zm00001d022082_P001 | Maize | extracellular, plasma membrane, vacuole | 69.37 | 66.89 |
| Solyc03g114890.2.1 | Tomato | extracellular | 61.48 | 66.08 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 71.23 | 65.6 |
| Solyc02g065770.2.1 | Tomato | extracellular | 67.29 | 65.32 |
| Os07t0604400-00 | Rice | extracellular | 68.21 | 65.19 |
| Solyc02g089120.2.1 | Tomato | extracellular | 67.52 | 65.1 |
| HORVU3Hr1G009960.1 | Barley | plastid | 32.02 | 63.3 |
| HORVU2Hr1G033060.13 | Barley | mitochondrion | 64.73 | 62.42 |
| TraesCS3D01G047900.1 | Wheat | plastid | 35.5 | 61.45 |
| TraesCSU01G047200.1 | Wheat | plastid | 32.25 | 59.91 |
| HORVU0Hr1G004650.3 | Barley | mitochondrion | 56.38 | 58.55 |
| Solyc03g114910.2.1 | Tomato | extracellular, plasma membrane, vacuole | 61.95 | 58.3 |
| Solyc03g070460.1.1 | Tomato | cytosol | 15.08 | 56.03 |
| HORVU2Hr1G033080.1 | Barley | extracellular | 23.2 | 54.35 |
| Solyc01g103860.2.1 | Tomato | cytosol | 50.35 | 51.3 |
| Solyc03g114880.1.1 | Tomato | cytosol, extracellular, vacuole | 36.43 | 49.22 |
| Solyc02g064790.1.1 | Tomato | extracellular, vacuole | 7.19 | 44.93 |
| Solyc01g111050.2.1 | Tomato | cytosol | 44.08 | 40.51 |
| Solyc03g070450.1.1 | Tomato | extracellular, vacuole | 15.78 | 31.63 |
| Solyc02g080250.1.1 | Tomato | cytosol | 19.72 | 24.85 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 29.7 | 19.63 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 29.0 | 19.29 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 29.0 | 18.63 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 25.29 | 17.72 |
| Solyc02g080240.1.1 | Tomato | extracellular | 11.83 | 13.25 |
Protein Annotations
| EnsemblPlants:Solyc03g070440.2.1 | EnsemblPlantsGene:Solyc03g070440.2 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | InterPro:COBRA_pln |
| PANTHER:PTHR31673 | PANTHER:PTHR31673:SF2 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 | SignalP:SignalP-noTM |
| UniParc:UPI0002767A04 | UniProt:K4BHH3 | MapMan:21.1.2.2 | : | : | : |
Description
No Description!
Coordinates
chr3:+:16340593..16342750
Molecular Weight (calculated)
48850.2 Da
IEP (calculated)
8.955
GRAVY (calculated)
-0.188
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIYLITLIG LLFGYAAAYD PLDPNGNITI KWDVMSWTPD GYVAVVTMNN FQMYRHIMSP GWTLGWTWAK KEVIWTMIGA QATEQGDCSK FKGNIPHCCK
101: KTPTVVDMLP GVPYNQQFTN CCKGGVLASW GQDPQSSVSA FQVSVGQAGT TNKTVKLPKN FTLLGPGPGY TCSPAKIVPP TKFFTPDLRR KTQALMTWNL
201: TCTYSQFVAQ KHPRCCVSLS TFYNETITSC PSCACGCENK HKCIKSDSKL LSMVGVNTPR KDNAPLLQCT QHMCPVRIHW HVKLNYKEYW RVKITVTNFN
301: YRVNYTQWTL VAQHPNLNNV TQVFSFDYKP LVPYQSINDT GMFYGMKFYN DLLMEAGPAG NVQSEVLLQK NKDTFTLKQG WAFPRKVYFN GDECMLPPPD
401: SYPYLPNFAH QNLDAFSTLF RSMLLILLVL F
101: KTPTVVDMLP GVPYNQQFTN CCKGGVLASW GQDPQSSVSA FQVSVGQAGT TNKTVKLPKN FTLLGPGPGY TCSPAKIVPP TKFFTPDLRR KTQALMTWNL
201: TCTYSQFVAQ KHPRCCVSLS TFYNETITSC PSCACGCENK HKCIKSDSKL LSMVGVNTPR KDNAPLLQCT QHMCPVRIHW HVKLNYKEYW RVKITVTNFN
301: YRVNYTQWTL VAQHPNLNNV TQVFSFDYKP LVPYQSINDT GMFYGMKFYN DLLMEAGPAG NVQSEVLLQK NKDTFTLKQG WAFPRKVYFN GDECMLPPPD
401: SYPYLPNFAH QNLDAFSTLF RSMLLILLVL F
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.