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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P14440_001 Banana plasma membrane 84.56 82.53
PGSC0003DMT400082702 Potato extracellular 43.18 77.82
KRG93686 Soybean extracellular, plasma membrane, vacuole 74.72 77.49
VIT_14s0083g01150.t01 Wine grape plasma membrane 74.5 77.26
AT5G15630.1 Thale cress extracellular, plasma membrane, vacuole 74.27 77.03
KRH45086 Soybean plasma membrane 73.83 76.57
KRH01361 Soybean extracellular, plasma membrane, vacuole 72.93 75.64
PGSC0003DMT400002674 Potato plasma membrane 72.93 75.12
KRH18350 Soybean cytosol 29.75 74.72
PGSC0003DMT400003723 Potato extracellular 72.48 74.65
Solyc03g070440.2.1 Tomato extracellular 71.81 74.48
Solyc02g089130.2.1 Tomato extracellular 72.26 74.42
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 72.04 74.19
EER94687 Sorghum extracellular 72.93 73.09
Bra008684.1-P Field mustard extracellular 63.09 72.87
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 72.04 72.04
Zm00001d047276_P001 Maize plasma membrane 72.26 71.78
EER99679 Sorghum plasma membrane 71.59 71.75
Solyc03g114900.2.1 Tomato extracellular 71.14 71.14
TraesCS2D01G182400.1 Wheat plasma membrane 71.14 71.14
TraesCS5D01G107900.1 Wheat extracellular 71.36 71.05
TraesCS5A01G095200.1 Wheat extracellular 71.36 71.05
TraesCS5B01G101400.1 Wheat extracellular 71.36 70.89
TraesCS2B01G201400.1 Wheat plasma membrane 70.92 70.76
TraesCS2A01G175000.1 Wheat plasma membrane 70.69 70.38
PGSC0003DMT400063055 Potato extracellular, mitochondrion 70.92 69.67
HORVU3Hr1G007580.2 Barley extracellular 58.39 69.6
Os07t0604400-00 Rice extracellular 68.9 68.29
Os03t0416200-01 Rice extracellular, golgi, plasma membrane 70.92 67.73
HORVU3Hr1G009960.1 Barley plastid 32.66 66.97
HORVU2Hr1G033060.13 Barley mitochondrion 65.55 65.55
TraesCSU01G047200.1 Wheat plastid 33.56 64.66
KRH63180 Soybean plasma membrane 65.77 64.19
KRH54737 Soybean plasma membrane 65.77 64.19
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 64.88 63.46
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 64.88 63.32
TraesCS3D01G047900.1 Wheat plastid 34.45 61.85
VIT_17s0000g05050.t01 Wine grape cytosol 8.28 61.67
HORVU0Hr1G004650.3 Barley mitochondrion 56.82 61.2
HORVU2Hr1G033080.1 Barley extracellular 24.61 59.78
GSMUA_Achr2P06240_001 Banana mitochondrion 63.31 59.33
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 25.95 56.31
AT5G60950.1 Thale cress endoplasmic reticulum 24.61 53.92
CDY26445 Canola cytosol 19.69 52.07
GSMUA_Achr4P27070_001 Banana cytosol 48.1 51.93
Solyc02g064790.1.1 Tomato extracellular, vacuole 7.16 46.38
VIT_17s0000g05060.t01 Wine grape plasma membrane 74.72 35.88
GSMUA_Achr8P10390_001 Banana cytosol 12.3 22.0
GSMUA_AchrUn_... Banana plasma membrane 29.53 19.79
GSMUA_Achr11P... Banana plasma membrane 28.86 19.08
GSMUA_Achr4P33540_001 Banana vacuole 27.74 18.65
GSMUA_Achr3P21560_001 Banana plasma membrane 26.4 17.99
Protein Annotations
EnsemblPlants:GSMUA_Achr4P03210_001EnsemblPlants:GSMUA_Achr4T03210_001EnsemblPlantsGene:GSMUA_Achr4G03210_001GO:GO:0005575GO:GO:0008150GO:GO:0009987
GO:GO:0010215GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
InterPro:COBRA_plnPANTHER:PTHR31673PANTHER:PTHR31673:SF2PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122
SEG:segSignalP:SignalP-noTMUniParc:UPI000295CF9BUniProt:M0SKN8MapMan:21.1.2.2:
Description
COBRA-like protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G03210_001]
Coordinates
chr4:+:2594917..2596629
Molecular Weight (calculated)
49744.0 Da
IEP (calculated)
8.420
GRAVY (calculated)
-0.069
Length
447 amino acids
Sequence
(BLAST)
001: MELNRTELRC VLSITVVLLL SSHAVAYDPL DPTGNITIKW DVMSWTADGY VAVVTMNNFQ MYRQIMSPGW TMGWTWAKKE VIWSMVGAQA TEQGDCSKFK
101: GNIPHCCKRT PAVVDLLPGV PYNQQIANCC KGGVVASYGQ DPAAAVSAFQ VSVGLSGTSN KTVKLPNNFT LLGPGLGYTC GPAKVVPSTT FLSADKRRKT
201: QALMTWNVTC TYSQFLASKH PSCCVSFSSF YNDTIIPCPS CACGCENKNC VKYVHTPPHP ILSTPGINTP KKDNTPLLQC THHMCPVRVH WHVKLNYKDY
301: WRAKVAITNF NYRLNYTQWT LVVQHPNLDN VTEVFSFEYK PLVAYGSIND TGMFYGMKYY NDVLMEAGAY GNVQSEVLLR KDADAFTFKQ GWAFPRKVYF
401: NGDECMLPPP DVYPYLPNSS PVSARVILHN LAAPLLALLL LQMAAPW
Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.