Factsheet for Solyc03g114900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063055	Potato	extracellular, mitochondrion	97.76	96.04
Solyc03g070440.2.1	Tomato	extracellular	74.05	76.8
Solyc02g089130.2.1	Tomato	extracellular	73.83	76.04
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	71.14	71.14
EER94687	Sorghum	extracellular	70.02	70.18
GSMUA_Achr4P14440_001	Banana	plasma membrane	71.36	69.65
Zm00001d047276_P001	Maize	plasma membrane	69.35	68.89
TraesCS5D01G107900.1	Wheat	extracellular	68.68	68.37
TraesCS5A01G095200.1	Wheat	extracellular	68.68	68.37
TraesCS5B01G101400.1	Wheat	extracellular	68.68	68.22
TraesCS2D01G182400.1	Wheat	plasma membrane	67.34	67.34
EER99679	Sorghum	plasma membrane	66.89	67.04
HORVU3Hr1G009960.1	Barley	plastid	32.66	66.97
TraesCS2B01G201400.1	Wheat	plasma membrane	67.11	66.96
TraesCS2A01G175000.1	Wheat	plasma membrane	67.11	66.82
HORVU3Hr1G007580.2	Barley	extracellular	55.93	66.67
Os03t0416200-01	Rice	extracellular, golgi, plasma membrane	69.57	66.45
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	66.0	66.0
Solyc03g114890.2.1	Tomato	extracellular	57.94	64.59
Os07t0604400-00	Rice	extracellular	65.1	64.52
Solyc02g065770.2.1	Tomato	extracellular	62.42	62.84
Solyc02g089120.2.1	Tomato	extracellular	62.64	62.64
HORVU2Hr1G033060.13	Barley	mitochondrion	62.42	62.42
TraesCSU01G047200.1	Wheat	plastid	31.99	61.64
TraesCS3D01G047900.1	Wheat	plastid	33.78	60.64
HORVU0Hr1G004650.3	Barley	mitochondrion	54.59	58.8
Solyc03g114910.2.1	Tomato	extracellular, plasma membrane, vacuole	57.94	56.55
Solyc03g070460.1.1	Tomato	cytosol	14.09	54.31
HORVU2Hr1G033080.1	Barley	extracellular	21.48	52.17
Solyc02g064790.1.1	Tomato	extracellular, vacuole	7.83	50.72
Solyc01g103860.2.1	Tomato	cytosol	47.2	49.88
Solyc03g114880.1.1	Tomato	cytosol, extracellular, vacuole	35.35	49.53
Solyc01g111050.2.1	Tomato	cytosol	41.61	39.66
VIT_17s0000g05060.t01	Wine grape	plasma membrane	75.39	36.2
Solyc03g070450.1.1	Tomato	extracellular, vacuole	14.99	31.16
Solyc02g080250.1.1	Tomato	cytosol	18.34	23.98
Solyc09g075540.1.1	Tomato	plasma membrane	27.74	19.02
Solyc01g065530.2.1	Tomato	nucleus, plastid	27.29	18.83
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	27.52	18.33
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	23.49	17.07
Solyc02g080240.1.1	Tomato	extracellular	11.19	12.99

Protein Annotations

EnsemblPlants:Solyc03g114900.2.1	EnsemblPlantsGene:Solyc03g114900.2	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31673	PANTHER:PTHR31673:SF2	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	SignalP:SignalP-noTM
UniParc:UPI00027685A8	UniProt:K4BKZ2	MapMan:21.1.2.2	:	:	:

Description

No Description!

Coordinates

chr3:+:64773139..64775068

Molecular Weight (calculated)

50533.8 Da

IEP (calculated)

8.831

GRAVY (calculated)

-0.246

Length

447 amino acids

Sequence
(BLAST)

001: MFHKKLSLNK LLFPLAKLTF FAVVLSSVLP HADAFDPLDP FGNITIKWDV MSWTPDGYVA VVTMNNFQMY RHIMSPGWTL GWNWPKKEVI WSIVGSQTTE
101: QGDCSKFKGN VPHCCKRDPV LVDLLPGVPY NQQFSNCCKG GVLASWGEDP SESVSSFQIS VGLAGTSNKT VKLPKNFTLL GPGPGYTCGP AKIVPSTVFL
201: TADHRRKTQA LMTWNVTCTY SQFLSSKYPS CCVSFSTFYN DTITPCPSCA CGCNHKHNCI MGDSEKLKRK GINTPRKNNE PLLQCTHHMC PIRVHWHVKL
301: NYKDYWRVKI AITNFNYRQN HTHWTLVAQH PNLNNVTQVF SFDYKPLVPY QSINDTGMFY GMKFYNDLLM EAGPSGNVQS EVLMQKDKNT FTLKSGWGFP
401: RRVYFNGDEC KLPPPDSYPI LPNSAEKGPF SFSNTAICTI LMIFLTW

Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)

001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W

Arabidopsis Description

COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.