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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022082_P001 Maize extracellular, plasma membrane, vacuole 81.6 82.33
EER99679 Sorghum plasma membrane 81.37 82.29
TraesCS2D01G182400.1 Wheat plasma membrane 80.04 80.76
TraesCS2A01G175000.1 Wheat plasma membrane 80.04 80.4
TraesCS2B01G201400.1 Wheat plasma membrane 79.16 79.69
HORVU2Hr1G033060.13 Barley mitochondrion 72.73 73.38
PGSC0003DMT400082702 Potato extracellular 38.58 70.16
AT5G15630.1 Thale cress extracellular, plasma membrane, vacuole 66.08 69.14
GSMUA_Achr4P03210_001 Banana endoplasmic reticulum, extracellular, plasma membrane 68.29 68.9
Solyc03g070440.2.1 Tomato extracellular 65.19 68.21
PGSC0003DMT400002674 Potato plasma membrane 65.63 68.2
HORVU0Hr1G004650.3 Barley mitochondrion 62.75 68.19
Os03t0416200-01 Rice extracellular, golgi, plasma membrane 70.73 68.16
KRH01361 Soybean extracellular, plasma membrane, vacuole 64.75 67.75
Bra023528.1-P Field mustard extracellular, plasma membrane, vacuole 65.19 67.74
KRH45086 Soybean plasma membrane 64.52 67.52
KRG93686 Soybean extracellular, plasma membrane, vacuole 64.3 67.29
PGSC0003DMT400003723 Potato extracellular 64.52 67.05
HORVU2Hr1G033080.1 Barley extracellular 27.27 66.85
VIT_14s0083g01150.t01 Wine grape plasma membrane 63.86 66.82
GSMUA_Achr4P14440_001 Banana plasma membrane 67.85 66.81
Solyc02g089130.2.1 Tomato extracellular 64.08 66.59
Bra008684.1-P Field mustard extracellular 56.76 66.15
KRH18350 Soybean cytosol 25.72 65.17
Solyc03g114900.2.1 Tomato extracellular 64.52 65.1
PGSC0003DMT400063055 Potato extracellular, mitochondrion 64.08 63.52
Os05t0386800-01 Rice extracellular 61.42 60.61
Os03t0754500-00 Rice extracellular 28.6 60.28
Os07t0604300-01 Rice extracellular 58.54 59.19
KRH63180 Soybean plasma membrane 57.65 56.77
KRH54737 Soybean plasma membrane 57.65 56.77
VIT_17s0000g05050.t01 Wine grape cytosol 7.54 56.67
Os03t0416300-01 Rice extracellular 56.76 55.9
Bra012993.1-P Field mustard endoplasmic reticulum, extracellular 25.06 54.85
Os10t0497700-01 Rice extracellular 49.45 52.47
AT5G60950.1 Thale cress endoplasmic reticulum 23.06 50.98
CDY26445 Canola cytosol 19.07 50.89
Solyc02g064790.1.1 Tomato extracellular, vacuole 7.76 50.72
Os04t0540300-00 Rice plasma membrane 45.23 46.47
VIT_17s0000g05060.t01 Wine grape plasma membrane 64.75 31.36
Os07t0690900-01 Rice plasma membrane 28.38 18.96
Os03t0301200-01 Rice extracellular, plasma membrane, vacuole 27.27 18.33
Os06t0685100-00 Rice plasma membrane 26.83 17.72
Protein Annotations
MapMan:21.1.2.2EntrezGene:4343845ProteinID:BAC83873.1ProteinID:BAT02550.1InterPro:COBRA_plnProteinID:EAZ40581.1
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007
EnsemblPlantsGene:Os07g0604400EnsemblPlants:Os07t0604400-00PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122PANTHER:PTHR31673
PANTHER:PTHR31673:SF20UniProt:Q6Z4G7SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00001BF4A8RefSeq:XP_015646929.1
SEG:seg:::::
Description
BC1L7Similar to COBRA-like protein 6. (Os07t0604400-00)
Coordinates
chr7:-:24755706..24758207
Molecular Weight (calculated)
49625.6 Da
IEP (calculated)
8.967
GRAVY (calculated)
-0.076
Length
451 amino acids
Sequence
(BLAST)
001: MAVLGSLLLL ILAATLSVAV AYDPLDPNGN ITIKWDVMSW TPDGYVAMVT INNYQTYRQI MAPGWTVGWT WARQEVIWSM VGAQATDQGD CSRFKANLPH
101: CCRRTPAVVD LLPGVPYNQQ IANCCRGGVL PAYGQAPSAA AAAFQVSVGQ AGTTNRTVRL PRNFTLLGPG PGYTCGRARV VPSTVFLTAD RRRKTQALMT
201: WNVTCTYSQH LASKYPSCCV SFSSFYNDTI VPCAKCACGC DAHKPCVRSE RDGKRLAVTG KKHDANANAH GRGNGVAAAA MAAPLLQCTT HMCPVRVHWH
301: VKLNYREYWR AKITIVNFNY RMNYTGWTLV AQHPNLDNIT EVFSFDYKPV VSYGSINDTA MFYGLKYFND QLMEAGPHGN VQSEVLMRKD ARTFTFRQGW
401: AFPRKVYFNG DECQMPPPDS YPYLPNAAPP AAASLVGSAV AMAALVFFLM A
Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)
001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W
Arabidopsis Description
COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.