Factsheet for VIT_14s0083g01150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082702	Potato	extracellular	47.1	81.85
KRH45086	Soybean	plasma membrane	81.67	81.67
KRH01361	Soybean	extracellular, plasma membrane, vacuole	81.44	81.44
KRG93686	Soybean	extracellular, plasma membrane, vacuole	81.21	81.21
PGSC0003DMT400002674	Potato	plasma membrane	81.67	81.11
PGSC0003DMT400003723	Potato	extracellular	81.44	80.88
AT5G15630.1	Thale cress	extracellular, plasma membrane, vacuole	80.05	80.05
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	78.89	78.34
CDX90983	Canola	extracellular	78.89	78.16
Bra008684.1-P	Field mustard	extracellular	70.07	78.04
KRH18350	Soybean	cytosol	31.09	75.28
CDX69511	Canola	plasma membrane	79.12	74.95
CDX85543	Canola	extracellular, plasma membrane, vacuole	78.89	74.56
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	77.26	74.5
CDY26444	Canola	plastid	62.41	73.5
GSMUA_Achr4P14440_001	Banana	plasma membrane	74.48	70.09
EER94687	Sorghum	extracellular	72.16	69.73
EER99679	Sorghum	plasma membrane	71.46	69.06
Zm00001d022082_P001	Maize	extracellular, plasma membrane, vacuole	70.77	68.23
Zm00001d047276_P001	Maize	plasma membrane	71.23	68.22
TraesCS2A01G175000.1	Wheat	plasma membrane	70.07	67.26
TraesCS5D01G107900.1	Wheat	extracellular	69.84	67.04
TraesCS2D01G182400.1	Wheat	plasma membrane	69.37	66.89
TraesCS5A01G095200.1	Wheat	extracellular	69.61	66.82
TraesCS2B01G201400.1	Wheat	plasma membrane	69.37	66.74
TraesCS5B01G101400.1	Wheat	extracellular	69.61	66.67
Os03t0416200-01	Rice	extracellular, golgi, plasma membrane	71.69	66.03
VIT_14s0083g01160.t01	Wine grape	vacuole	66.59	65.83
HORVU3Hr1G007580.2	Barley	extracellular	57.08	65.6
VIT_17s0000g05050.t01	Wine grape	cytosol	9.05	65.0
Os07t0604400-00	Rice	extracellular	66.82	63.86
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	66.36	62.72
HORVU2Hr1G033060.13	Barley	mitochondrion	64.73	62.42
HORVU3Hr1G009960.1	Barley	plastid	31.09	61.47
TraesCSU01G047200.1	Wheat	plastid	32.02	59.48
HORVU0Hr1G004650.3	Barley	mitochondrion	56.61	58.8
TraesCS3D01G047900.1	Wheat	plastid	33.18	57.43
CDY02181	Canola	endoplasmic reticulum, extracellular	26.45	55.34
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	26.45	55.34
CDY58695	Canola	extracellular	25.75	53.88
HORVU2Hr1G033080.1	Barley	extracellular	22.97	53.8
AT5G60950.1	Thale cress	endoplasmic reticulum	25.06	52.94
VIT_12s0035g00630.t01	Wine grape	extracellular, plasma membrane	47.8	47.8
VIT_03s0038g01430.t01	Wine grape	mitochondrion	15.78	41.21
VIT_03s0038g01420.t01	Wine grape	extracellular, plasma membrane	23.9	41.2
CDX70627	Canola	cytosol, nucleus, plasma membrane	79.58	39.98
VIT_17s0000g05060.t01	Wine grape	plasma membrane	78.19	36.2
CDX87194	Canola	mitochondrion	13.46	27.75
VIT_07s0005g01020.t01	Wine grape	plasma membrane	29.23	19.47
VIT_05s0077g01470.t01	Wine grape	plasma membrane	29.0	19.2
VIT_19s0177g00160.t01	Wine grape	plasma membrane	29.0	19.08
VIT_10s0116g00620.t01	Wine grape	extracellular	27.84	18.35

Protein Annotations

EntrezGene:100244586	wikigene:100244586	MapMan:21.1.2.2	ProteinID:CBI16945	ProteinID:CBI16945.3	InterPro:COBRA_pln
UniProt:D7SMP7	EMBL:FN594955	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	EntrezGene:LOC100244586
wikigene:LOC100244586	PFAM:PD140986	PFAM:PF04833	PIRSF:PIRSF038122	PANTHER:PTHR31673	PANTHER:PTHR31673:SF2
SignalP:SignalP-noTM	UniParc:UPI0001BE0CA2	ArrayExpress:VIT_14s0083g01150	EnsemblPlantsGene:VIT_14s0083g01150	EnsemblPlants:VIT_14s0083g01150.t01	RefSeq:XP_002277911
RefSeq:XP_002277911.2	:	:	:	:	:

Description

COBRA-like protein [Source:UniProtKB/TrEMBL;Acc:D7SMP7]

Coordinates

chr14:+:23524839..23527545

Molecular Weight (calculated)

48903.9 Da

IEP (calculated)

8.800

GRAVY (calculated)

-0.127

Length

431 amino acids

Sequence
(BLAST)

001: MRFVISAFFF LMMFSYTAAY DPLDPNGNIT IKWDIMSWTP DGYVAVVTMH NFQMYRHIIS PGWTLGWTWA KKEVIWSMVG AQTTEQGDCS KFKGNIPHCC
101: KKTPTVVDLL PGVPYNQQFS NCCKGGVVSS WGQDPAASVS AFQVSVGLAG TSNKTVKLPK NFTLLGPGPG YTCGIAKIVP PTNFLTPDRR RKTQALMTWN
201: VTCTYSQLRA RKNPSCCVSF SSFYNETITP CPSCACGCQN KNNCVQSDSK LLSMVGINTP RKDNVPLLQC THHMCPVRVH WHLKINYKDY WRVKVSITNF
301: NYRLNYTLWT LVVQHPNLNN VTQVFSFDYK PLVPYESIND TGMFYGMKFY NDQLMEAGPF GNVQSEVLFQ KDNSFTFKQG WAFPRKVYFN GDECMLPLPE
401: TYPFLPNSAH QNLLAFSTFI SSVIFLLVTV W

Best Arabidopsis Sequence Match ( AT5G15630.1 )
(BLAST)

001: MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC
101: CKKTPTVVDL LPGVPYNQQF SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV PSTVFLTTDK RRKTQALMTW
201: NVTCTYSQFL ARKHPSCCVS FSSFYNDTIT PCPSCACGCE NKKSCVKADS KILTKKGLNT PKKDNTPLLQ CTHHMCPVRV HWHVKTNYKD YWRVKIAITN
301: FNYRMNHTLW TLAIQHPNLN NVTQVFSFDY KPVSPYGSIN DTGMFYGTKF YNDLLMEAGP SGNVQSEVLL QKDQKTFTFK QGWAFPRKVY FNGDECMLPP
401: PDSYPFLPNS AQGNFASFSL TILLLLFISI W

Arabidopsis Description

COBL4COBRA-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFW3]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.