Factsheet for VIT_03s0038g01420.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
plasma membrane 6
plastid 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51434	Soybean	endoplasmic reticulum, plasma membrane, vacuole	57.6	32.36
KRH60734	Soybean	plasma membrane	57.6	32.21
Solyc01g111050.2.1	Tomato	cytosol	58.4	31.13
VIT_14s0083g01160.t01	Wine grape	vacuole	44.4	25.46
VIT_14s0083g01150.t01	Wine grape	plasma membrane	41.2	23.9
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	43.2	23.68
VIT_12s0035g00630.t01	Wine grape	extracellular, plasma membrane	40.4	23.43
VIT_17s0000g05060.t01	Wine grape	plasma membrane	41.2	11.06
VIT_19s0177g00160.t01	Wine grape	plasma membrane	27.6	10.53
VIT_05s0077g01470.t01	Wine grape	plasma membrane	26.0	9.98
VIT_10s0116g00620.t01	Wine grape	extracellular	25.6	9.79
VIT_07s0005g01020.t01	Wine grape	plasma membrane	24.8	9.58
PGSC0003DMT400004139	Potato	extracellular	3.6	4.37
VIT_03s0038g01430.t01	Wine grape	mitochondrion	1.2	1.82
VIT_17s0000g05050.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

MapMan:21.1.2.2	ProteinID:CBI37942	ProteinID:CBI37942.3	InterPro:COBRA_pln	UniProt:D7U5C3	EMBL:FN596508
GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	PFAM:PD140986	PFAM:PF04833
PANTHER:PTHR31673	PANTHER:PTHR31673:SF9	TMHMM:TMhelix	UniParc:UPI0001BE4C44	ArrayExpress:VIT_03s0038g01420	EnsemblPlantsGene:VIT_03s0038g01420
EnsemblPlants:VIT_03s0038g01420.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:991431..993320

Molecular Weight (calculated)

27842.6 Da

IEP (calculated)

7.223

GRAVY (calculated)

0.014

Length

250 amino acids

Sequence
(BLAST)

001: MTLWIPMGTS QLLLILINGQ MMAMWLLFWL RLSNCLLQAR VTIQNYYQYR HVEKQGWKLG WTWAKDEVIW SMSGAFATQQ GNCSSFIVQT PHSCLKNPVI
101: VDLEPTAAPE NMTEDCCHGG ILSAWAIIPS NSFSSFEIMV GNLEGNTHGN KPLNLTLMAP GPGYTCSPIE DTDPTVSLVI GGRREIQVFR TWKSTCTYST
201: FLSNKVPVCC VSLSTFYSPT ITTCPQCSCG CRDANPSTDS CIRCVPRYHS

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.