Factsheet for VIT_05s0077g01470.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065836	Potato	cytosol	50.84	70.58
KRH50776	Soybean	endoplasmic reticulum, vacuole	68.97	69.83
KRH02312	Soybean	endoplasmic reticulum, extracellular	68.36	69.1
Solyc01g065530.2.1	Tomato	nucleus, plastid	68.51	68.83
PGSC0003DMT400065840	Potato	endoplasmic reticulum, extracellular, plasma membrane	68.2	68.2
CDY32210	Canola	plasma membrane	66.82	65.91
Bra033528.1-P	Field mustard	plasma membrane	66.67	65.86
CDY34424	Canola	plasma membrane	66.67	65.86
AT4G16120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	66.51	65.51
VIT_07s0005g01020.t01	Wine grape	plasma membrane	64.52	64.92
AT3G16860.1	Thale cress	plasma membrane	62.21	62.02
CDY52722	Canola	endoplasmic reticulum, plasma membrane, vacuole	61.6	60.3
CDY34980	Canola	endoplasmic reticulum, plasma membrane, vacuole	59.45	58.02
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	59.29	57.87
GSMUA_AchrUn_...	Banana	plasma membrane	56.68	55.32
VIT_19s0177g00160.t01	Wine grape	plasma membrane	55.45	55.11
GSMUA_Achr11P...	Banana	plasma membrane	57.14	55.03
VIT_10s0116g00620.t01	Wine grape	extracellular	55.15	54.89
Zm00001d028826_P001	Maize	plasma membrane	54.53	53.22
Os03t0301200-01	Rice	extracellular, plasma membrane, vacuole	54.53	52.91
EER95000	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	53.76	52.24
TraesCS4B01G187300.1	Wheat	golgi	53.46	52.17
TraesCS4D01G188600.1	Wheat	golgi	53.46	51.71
TraesCS4A01G117100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	53.3	51.56
Zm00001d007208_P001	Maize	extracellular, plasma membrane, vacuole	51.0	50.76
GSMUA_Achr8P10390_001	Banana	cytosol	19.35	50.4
OQU90545	Sorghum	extracellular, plasma membrane, vacuole	50.69	49.92
TraesCS2D01G092100.1	Wheat	plasma membrane	48.69	48.03
HORVU0Hr1G030030.1	Barley	extracellular, plasma membrane	48.69	47.96
TraesCS2B01G107700.1	Wheat	plasma membrane	48.54	47.95
HORVU2Hr1G015440.1	Barley	cytosol	39.32	46.46
Os07t0690900-01	Rice	plasma membrane	48.08	46.37
TraesCS2A01G092900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	48.23	45.38
HORVU4Hr1G054770.1	Barley	plastid	53.76	44.3
VIT_14s0083g01150.t01	Wine grape	plasma membrane	19.2	29.0
VIT_12s0035g00630.t01	Wine grape	extracellular, plasma membrane	19.05	28.77
VIT_14s0083g01160.t01	Wine grape	vacuole	18.43	27.52
VIT_17s0000g05070.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	18.59	26.54
VIT_03s0038g01420.t01	Wine grape	extracellular, plasma membrane	9.98	26.0
VIT_03s0038g01430.t01	Wine grape	mitochondrion	5.99	23.64
VIT_17s0000g05050.t01	Wine grape	cytosol	2.15	23.33
VIT_17s0000g05060.t01	Wine grape	plasma membrane	18.89	13.21

Protein Annotations

EntrezGene:100258513	wikigene:100258513	MapMan:21.1.2.2	ProteinID:CBI22926	ProteinID:CBI22926.3	InterPro:COBRA_pln
UniProt:D7SY69	EMBL:FN595246	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	EntrezGene:LOC100258513
wikigene:LOC100258513	PFAM:PD140986	PFAM:PF04833	PANTHER:PTHR31052	PANTHER:PTHR31052:SF3	SignalP:SignalP-noTM
TIGR:TC67405	UniParc:UPI00015CBA5B	ArrayExpress:VIT_05s0077g01470	EnsemblPlantsGene:VIT_05s0077g01470	EnsemblPlants:VIT_05s0077g01470.t01	unigene:Vvi.12230
RefSeq:XP_002275330	RefSeq:XP_002275330.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:+:1178868..1182557

Molecular Weight (calculated)

70829.1 Da

IEP (calculated)

4.629

GRAVY (calculated)

-0.124

Length

651 amino acids

Sequence
(BLAST)

001: MAFSLIRLLV LDLIVAALIP IALCQSEAPS PTADSCNGIF LSYAYTSGAK IPPNLNSDPT EQPYRFESTL TVLNNGLEEL KSWRVFVGFQ HKEYLVSASG
101: AVLANGTSLP ATVGGGVVFA GYPSTDLKTA IETAGDTTQM QIQVQFVGTQ FGVGSPNVPM PTNVSLVNDG FVCPKPTMQG TSEMQVCCTK DSNYKSNVSS
201: DDEFLPRQNG DLTIMYDVTR TYESSYWAQI TISNHNPLGR LDDWKLSWDW MKGEFINSMK GAYPDIVDTT DCIFGEQGQY YQDLDFSNVL NCERRPTIID
301: LPPTKANDTT LGLIPFCCRN GTILPPTMDP SKSTSVFQMN VYKMPPDLNR SELTPPQNWN ISGTLNPDYQ CGSPVRVSPS EFPDTSGLPS NSTAVASWQV
401: VCNITQPKGA SPKCCVSFSA YYNESVVPCK TCACGCPSTP SQTCSTTAAA ILLPSEALLV PFENRTALTK AWAELKHLTI PNPMPCGDNC GVSINWHLYT
501: DYSRGWTARI TIFNWGETSY VDWFAAVEMD KAAPGFEKMY SFNATALDGV NNTIFMQGIE GLNYLVAETD AANPKKDPRV PGKQQSVISF TKKPTPGINV
601: AGGAGFPSKV FFNGEECSLP SVLPTSSSYK KSPAMTISVL LLIVVLMLMQ Q

Best Arabidopsis Sequence Match ( AT4G16120.1 )
(BLAST)

001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A

Arabidopsis Description

COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.