Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G187300.1 | Wheat | golgi | 97.47 | 98.35 |
| TraesCS4A01G117100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 98.07 | 98.07 |
| Zm00001d028826_P001 | Maize | plasma membrane | 84.7 | 85.46 |
| EER95000 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 84.55 | 84.93 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 82.76 | 83.01 |
| HORVU4Hr1G054770.1 | Barley | plastid | 94.8 | 80.76 |
| TraesCS2D01G092100.1 | Wheat | plasma membrane | 59.14 | 60.3 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 58.25 | 58.77 |
| GSMUA_Achr11P... | Banana | plasma membrane | 58.1 | 57.84 |
| PGSC0003DMT400065836 | Potato | cytosol | 38.63 | 55.44 |
| KRH02312 | Soybean | endoplasmic reticulum, extracellular | 52.75 | 55.12 |
| KRH50776 | Soybean | endoplasmic reticulum, vacuole | 52.6 | 55.05 |
| VIT_05s0077g01470.t01 | Wine grape | plasma membrane | 51.71 | 53.46 |
| CDY34424 | Canola | plasma membrane | 51.26 | 52.35 |
| Bra033528.1-P | Field mustard | plasma membrane | 50.97 | 52.05 |
| CDY32210 | Canola | plasma membrane | 50.82 | 51.82 |
| AT4G16120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 50.37 | 51.29 |
| PGSC0003DMT400065840 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 48.59 | 50.23 |
| VIT_07s0005g01020.t01 | Wine grape | plasma membrane | 48.14 | 50.08 |
| KRH37033 | Soybean | extracellular | 48.29 | 50.0 |
| Solyc01g065530.2.1 | Tomato | nucleus, plastid | 47.99 | 49.85 |
| AT3G16860.1 | Thale cress | plasma membrane | 48.14 | 49.62 |
| Bra036147.1-P | Field mustard | plasma membrane | 48.44 | 49.24 |
| CDY49611 | Canola | plasma membrane | 48.44 | 49.24 |
| CDY00037 | Canola | plasma membrane | 48.29 | 49.09 |
| Solyc09g075540.1.1 | Tomato | plasma membrane | 47.55 | 49.08 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.29 | 48.87 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 47.99 | 48.43 |
| AT5G49270.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.7 | 48.42 |
| Bra021208.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 47.85 | 48.28 |
| GSMUA_Achr8P10390_001 | Banana | cytosol | 17.24 | 46.4 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 46.06 | 45.99 |
| TraesCS6D01G364400.1 | Wheat | extracellular | 18.57 | 27.96 |
| TraesCS5D01G401900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 18.87 | 27.79 |
| TraesCS5D01G402000.1 | Wheat | extracellular | 9.36 | 27.63 |
| TraesCS4D01G082700.1 | Wheat | extracellular | 18.87 | 27.55 |
| TraesCS2D01G182400.1 | Wheat | plasma membrane | 18.13 | 27.29 |
| TraesCS5D01G107900.1 | Wheat | extracellular | 17.24 | 25.84 |
| TraesCS2D01G182500.1 | Wheat | golgi | 17.38 | 25.71 |
| TraesCS3D01G047900.1 | Wheat | plastid | 8.77 | 23.69 |
| TraesCS2D01G386400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 15.16 | 23.08 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 14.86 | 21.88 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G188600.1 | EnsemblPlantsGene:TraesCS4D01G188600 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | InterPro:COBRA_pln |
| PANTHER:PTHR31052 | PANTHER:PTHR31052:SF10 | PFAM:PD140986 | PFAM:PF04833 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | MapMan:21.1.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:327845167..327847188
Molecular Weight (calculated)
72334.4 Da
IEP (calculated)
6.593
GRAVY (calculated)
-0.090
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSIASQAV VLGAILLLAG LAAAQQTPRA PAAAAAPAPD PGCNGIQLTY NLQGREKIRP FVPDRSKQPY SFKANASVLN GGTRPLRSWS MLVTFGHDEI
101: LVGVGGAVLT GGAELPYNTT EDAGNATSFS GYPQTDLLTP IATAGDITQI QASVGLVGTL FAGPRGLVPE PLPTALTLDD PDYNCPAATN VTATMLTTCC
201: LLTPEAEANA TVPEANATDP TKSFLPRRTG DLVITYDVVQ AYPTSYLALV TLENNAKLGR LDNWRLSWEW RRGEFIYSMK GAHPLEVDVN ECIYGAPGQY
301: YQSLDFSQVL NCEKKPVILD LPLSRYNDTQ MGKIEHCCRN GTILPKSMDA AQSKSAFQMQ VFKMPPDTNR TKLFPPANFK ISGGSSLNPD YSCGQPVPVS
401: PTGFPNPSGL DSTTLAVATW QVVCNITTAK GAKPKCCVTF SAHYNDSVIP CNTCACGCPV NRRGPTCSTT APSMILPPEA LLVPFDNRTQ KAQAWAQLKH
501: YNVPRPMPCG DFCGVSINWH VSTDFNKGWS ARVTLFNWGD VDMANWFAAM VMDKAYDGFE KAYSFNATAE GNNTIFMQGL EGLNYLVKQT NMSGSDYLVP
601: GKQQSVLSFT KKLTPDIDVV AGDGFPTKVF FNGDECAMPQ RLPIKSGGFR THLSSAFALV LLMAASALLL LQQ
101: LVGVGGAVLT GGAELPYNTT EDAGNATSFS GYPQTDLLTP IATAGDITQI QASVGLVGTL FAGPRGLVPE PLPTALTLDD PDYNCPAATN VTATMLTTCC
201: LLTPEAEANA TVPEANATDP TKSFLPRRTG DLVITYDVVQ AYPTSYLALV TLENNAKLGR LDNWRLSWEW RRGEFIYSMK GAHPLEVDVN ECIYGAPGQY
301: YQSLDFSQVL NCEKKPVILD LPLSRYNDTQ MGKIEHCCRN GTILPKSMDA AQSKSAFQMQ VFKMPPDTNR TKLFPPANFK ISGGSSLNPD YSCGQPVPVS
401: PTGFPNPSGL DSTTLAVATW QVVCNITTAK GAKPKCCVTF SAHYNDSVIP CNTCACGCPV NRRGPTCSTT APSMILPPEA LLVPFDNRTQ KAQAWAQLKH
501: YNVPRPMPCG DFCGVSINWH VSTDFNKGWS ARVTLFNWGD VDMANWFAAM VMDKAYDGFE KAYSFNATAE GNNTIFMQGL EGLNYLVKQT NMSGSDYLVP
601: GKQQSVLSFT KKLTPDIDVV AGDGFPTKVF FNGDECAMPQ RLPIKSGGFR THLSSAFALV LLMAASALLL LQQ
001: MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
101: ILVSASNAVL SDGSSLPVSV ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC PKATQKGTNV LQVCCIPDPD
201: YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA
301: RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT
401: AFASWQVVCN ITQPKDASPR CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW AYLKQRPVPN PMPCGDNCGV
501: SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF
601: TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR A
Arabidopsis Description
COBL7COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.