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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G409900.1 Wheat plastid 50.55 83.39
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 72.43 79.19
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 78.77 76.27
Os07t0604300-01 Rice extracellular 61.71 63.23
KRH72178 Soybean mitochondrion 50.55 62.6
EER97506 Sorghum extracellular, plasma membrane 62.58 62.45
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 59.74 59.35
VIT_14s0083g01160.t01 Wine grape vacuole 56.02 58.72
CDY70289 Canola extracellular 50.77 58.44
KRH01360 Soybean extracellular, golgi, plasma membrane 57.11 58.26
CDX86358 Canola extracellular 55.36 58.03
Bra025406.1-P Field mustard extracellular 55.36 58.03
CDX85277 Canola extracellular 55.14 57.8
KRG93684 Soybean extracellular, vacuole 57.33 57.71
KRH54735 Soybean endoplasmic reticulum 57.33 57.46
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 57.33 57.46
PGSC0003DMT400003470 Potato extracellular 56.02 57.27
Solyc02g065770.2.1 Tomato extracellular 55.58 57.21
KRH63181 Soybean endoplasmic reticulum 56.89 57.02
Bra040587.1-P Field mustard extracellular 54.7 56.95
KRH45084 Soybean extracellular, golgi, plasma membrane 55.8 56.92
KRH03165 Soybean extracellular 56.46 56.83
KRH18352 Soybean plasma membrane 56.89 56.77
Solyc02g089120.2.1 Tomato extracellular 55.36 56.6
PGSC0003DMT400068328 Potato extracellular 54.92 56.53
TraesCS2D01G182500.1 Wheat golgi 55.58 55.82
AT3G29810.1 Thale cress extracellular 53.61 55.56
CDY24004 Canola cytosol, nucleus, plastid 10.28 55.29
TraesCS6D01G364400.1 Wheat extracellular 53.39 54.59
AT3G02210.1 Thale cress extracellular 53.39 53.98
TraesCS4D01G082700.1 Wheat extracellular 54.27 53.8
Bra039163.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 53.39 53.63
CDY43250 Canola plasma membrane 53.61 53.61
AT5G60920.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 53.17 53.29
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 53.17 53.17
CDY02184 Canola plasma membrane 53.17 53.17
CDX87193 Canola plasma membrane 52.95 53.07
CDY58691 Canola plasma membrane 53.17 53.06
CDY60470 Canola plasma membrane 53.17 53.06
Bra012996.1-P Field mustard plasma membrane 52.95 52.95
CDY16831 Canola plasma membrane 52.95 52.84
CDY42842 Canola cytosol 14.0 52.46
Bra035951.1-P Field mustard plasma membrane 52.3 52.18
TraesCS5D01G107900.1 Wheat extracellular 50.98 51.89
TraesCS2D01G182400.1 Wheat plasma membrane 49.67 50.78
CDY29033 Canola cytosol 19.91 50.0
Bra029346.1-P Field mustard cytosol, plasma membrane, plastid 13.35 49.59
TraesCS5D01G402000.1 Wheat extracellular 24.29 48.68
KRH56778 Soybean extracellular 21.66 47.37
TraesCS3D01G047900.1 Wheat plastid 24.29 44.58
TraesCS2D01G386400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.61 40.95
CDY14723 Canola cytosol 23.41 33.65
TraesCS4D01G188600.1 Wheat golgi 21.88 14.86
TraesCS7D01G136500.1 Wheat mitochondrion 21.66 14.69
TraesCS2D01G092100.1 Wheat plasma membrane 20.13 13.94
Protein Annotations
EnsemblPlants:TraesCS3D01G404800.2EnsemblPlantsGene:TraesCS3D01G404800GO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007InterPro:COBRA_pln
PANTHER:PTHR31673PANTHER:PTHR31673:SF7PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122TMHMM:TMhelix
MapMan:21.1.2.2:::::
Description
No Description!
Coordinates
chr3D:-:519248031..519251606
Molecular Weight (calculated)
52176.5 Da
IEP (calculated)
8.601
GRAVY (calculated)
-0.173
Length
457 amino acids
Sequence
(BLAST)
001: MQELFVDDGN FQKALLKFYM NHLRAICLLE SLYFLFFFIY AFSTFLWFTV FFIHLLFFSE SKMFEMKAFM CRHKECGAYD PLDPTGNITI RWDVRSWVPD
101: GYVAEVSLFN YQQYRHIQPP GWKLGWVWSK KEVIWYVQGG QATEQGDCSK FKEIIPHSCK VNPEIVDLLP GAPYNRQRAN CCKGGVLSSL AQDPANAVAS
201: FEVSVGRSGT TTKTLELPVN FTLKAPGPGY TCGPATKLDE PTKFTTPDGS RKSQAHMTWT VTCTYSQFLA LRGNSPYLGS VMNGQDKNGL ASLVQCTTHM
301: CPIRVHWHVK ANYKEYWRVK ITVTNFNYGM NYSQWNLVAQ HPNFNSLTSI TSFNYTALNP YGLMNDTALL WGIRHYNDYL LTAGPDGYVQ SELLFRKDPS
401: TFTLRAGWAF PRRVYFNGDK CVTPPPDAYP WLPNASTKST ISVIVPLVLW MLANPYF
Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)
001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL
Arabidopsis Description
COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.