Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97506 | Sorghum | extracellular, plasma membrane | 85.65 | 83.41 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 81.39 | 78.91 |
| VIT_14s0083g01160.t01 | Wine grape | vacuole | 73.32 | 75.0 |
| KRH72178 | Soybean | mitochondrion | 60.99 | 73.71 |
| Solyc02g089120.2.1 | Tomato | extracellular | 72.65 | 72.48 |
| PGSC0003DMT400003470 | Potato | extracellular | 72.65 | 72.48 |
| Os03t0416300-01 | Rice | extracellular | 74.22 | 72.27 |
| VIT_17s0000g05070.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 73.09 | 71.49 |
| Solyc02g065770.2.1 | Tomato | extracellular | 70.63 | 70.95 |
| Bra025406.1-P | Field mustard | extracellular | 69.28 | 70.87 |
| CDX86358 | Canola | extracellular | 69.28 | 70.87 |
| TraesCS2A01G175100.1 | Wheat | extracellular | 71.75 | 70.64 |
| TraesCS3A01G409900.1 | Wheat | plastid | 43.72 | 70.4 |
| KRH01360 | Soybean | extracellular, golgi, plasma membrane | 70.63 | 70.31 |
| Os05t0386800-01 | Rice | extracellular | 71.97 | 70.24 |
| CDX85277 | Canola | extracellular | 68.61 | 70.18 |
| KRH54735 | Soybean | endoplasmic reticulum | 71.75 | 70.18 |
| Os03t0754500-00 | Rice | extracellular | 33.63 | 70.09 |
| PGSC0003DMT400068328 | Potato | extracellular | 69.73 | 70.05 |
| KRH03165 | Soybean | extracellular | 71.3 | 70.04 |
| CDY70289 | Canola | extracellular | 62.11 | 69.77 |
| KRH63181 | Soybean | endoplasmic reticulum | 71.08 | 69.52 |
| TraesCS2D01G182500.1 | Wheat | golgi | 70.63 | 69.23 |
| KRH45084 | Soybean | extracellular, golgi, plasma membrane | 69.51 | 69.2 |
| AT3G29810.1 | Thale cress | extracellular | 68.16 | 68.93 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 70.63 | 68.63 |
| Bra040587.1-P | Field mustard | extracellular | 66.82 | 67.88 |
| AT5G60920.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 69.28 | 67.76 |
| CDX87193 | Canola | plasma membrane | 69.06 | 67.54 |
| CDY16831 | Canola | plasma membrane | 69.28 | 67.47 |
| CDY02184 | Canola | plasma membrane | 69.06 | 67.4 |
| HORVU2Hr1G033070.14 | Barley | mitochondrion | 70.85 | 67.23 |
| KRG93684 | Soybean | extracellular, vacuole | 68.39 | 67.18 |
| Bra012996.1-P | Field mustard | plasma membrane | 68.83 | 67.18 |
| KRH18352 | Soybean | plasma membrane | 68.83 | 67.03 |
| Bra035951.1-P | Field mustard | plasma membrane | 68.61 | 66.81 |
| CDY58691 | Canola | plasma membrane | 68.61 | 66.81 |
| Bra039163.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 67.71 | 66.37 |
| AT3G02210.1 | Thale cress | extracellular | 67.26 | 66.37 |
| CDY60470 | Canola | plasma membrane | 67.71 | 65.94 |
| CDY43250 | Canola | plasma membrane | 67.49 | 65.86 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 60.76 | 64.83 |
| HORVU5Hr1G067940.1 | Barley | plasma membrane, plastid | 67.71 | 63.98 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 12.11 | 63.53 |
| CDY42842 | Canola | cytosol | 17.04 | 62.3 |
| TraesCS3D01G404800.2 | Wheat | plasma membrane | 63.23 | 61.71 |
| Bra029346.1-P | Field mustard | cytosol, plasma membrane, plastid | 16.82 | 60.98 |
| Os10t0497700-01 | Rice | extracellular | 56.73 | 59.53 |
| Os07t0604400-00 | Rice | extracellular | 59.19 | 58.54 |
| Os03t0416200-01 | Rice | extracellular, golgi, plasma membrane | 60.31 | 57.48 |
| KRH56778 | Soybean | extracellular | 25.78 | 55.02 |
| CDY29033 | Canola | cytosol | 21.97 | 53.85 |
| Os04t0540300-00 | Rice | plasma membrane | 47.98 | 48.75 |
| CDY14723 | Canola | cytosol | 26.46 | 37.11 |
| Os03t0301200-01 | Rice | extracellular, plasma membrane, vacuole | 28.48 | 18.93 |
| Os07t0690900-01 | Rice | plasma membrane | 27.8 | 18.37 |
| Os06t0685100-00 | Rice | plasma membrane | 26.01 | 16.98 |
Protein Annotations
| MapMan:21.1.2.2 | EntrezGene:4343844 | EMBL:AK101860 | EMBL:AK121884 | ProteinID:BAC83872.1 | ProteinID:BAF22133.2 |
| ProteinID:BAT02549.1 | InterPro:COBRA_pln | ProteinID:EAZ40580.1 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:Os07g0604300 | EnsemblPlants:Os07t0604300-01 | PFAM:PD140986 |
| PFAM:PF04833 | PIRSF:PIRSF038122 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF7 | UniProt:Q6Z4G8 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00001BF4A7 | RefSeq:XP_015646930.1 | : | : | : |
Description
BC1L6Similar to Phytochelatin synthetase (Fragment). (Os07t0604300-01)
Coordinates
chr7:+:24751787..24755315
Molecular Weight (calculated)
50137.0 Da
IEP (calculated)
8.706
GRAVY (calculated)
-0.181
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLLLRMGV SVALLVAFFS SLIPSSEAYD PLDPNGNITI KWDVLQWTPD GYVAVVSLYN YQQYRHIQSP GWKLGWVWAK KEIIWAMNGG QATEQGDCSK
101: FKSNIPHCCK KDPEIVDLLP GTPYNMQIAN CCKGGVLNSW AQDPANAIAS FQVSVGQAGT TNKTVRVPRN FTLKSPGPGY TCGSAKVVRP TKFFSQDGRR
201: TTQAHMTWNV TCTYSQIVAQ RSPTCCVSLS SFYNDTIVNC PTCSCGCQNN KPGSCVEGNS PYLASVVNTH NKDSLTPLVQ CTSHMCPIRV HWHVKVNYKE
301: YWRVKITVTN FNYRMNYSQW NLVTQHPSFD NLTTIFSFNY KSLNPYGVIN DTAMLWGIKY YNDLLMTAGP DGNVQSELLF KKDPKSFTFE KGWAFPRRVY
401: FNGDNCVMPP PDAYPWLPNA STRVMSSILL PFITIWTALT FLMVYA
101: FKSNIPHCCK KDPEIVDLLP GTPYNMQIAN CCKGGVLNSW AQDPANAIAS FQVSVGQAGT TNKTVRVPRN FTLKSPGPGY TCGSAKVVRP TKFFSQDGRR
201: TTQAHMTWNV TCTYSQIVAQ RSPTCCVSLS SFYNDTIVNC PTCSCGCQNN KPGSCVEGNS PYLASVVNTH NKDSLTPLVQ CTSHMCPIRV HWHVKVNYKE
301: YWRVKITVTN FNYRMNYSQW NLVTQHPSFD NLTTIFSFNY KSLNPYGVIN DTAMLWGIKY YNDLLMTAGP DGNVQSELLF KKDPKSFTFE KGWAFPRRVY
401: FNGDNCVMPP PDAYPWLPNA STRVMSSILL PFITIWTALT FLMVYA
001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
Arabidopsis Description
COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.