Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66895 Canola cytosol 12.45 100.0
Bra035951.1-P Field mustard plasma membrane 99.34 99.34
CDX87193 Canola plasma membrane 98.91 99.34
CDY02184 Canola plasma membrane 94.54 94.75
CDY58691 Canola plasma membrane 94.54 94.54
AT5G60920.1 Thale cress endoplasmic reticulum, plasma membrane, plastid 92.58 92.98
CDY42842 Canola cytosol 21.4 80.33
VIT_17s0000g05070.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 75.76 76.1
PGSC0003DMT400003470 Potato extracellular 73.36 75.17
Solyc02g065770.2.1 Tomato extracellular 72.71 75.0
Zm00001d031479_P001 Maize cytosol, mitochondrion 26.86 75.0
PGSC0003DMT400068328 Potato extracellular 72.49 74.77
Solyc02g089120.2.1 Tomato extracellular 72.93 74.72
KRH54735 Soybean endoplasmic reticulum 73.8 74.12
KRH63181 Soybean endoplasmic reticulum 73.36 73.68
KRH03165 Soybean extracellular 72.71 73.35
GSMUA_Achr4P01440_001 Banana extracellular, plasma membrane 72.93 73.09
CDX86358 Canola extracellular 69.43 72.94
GSMUA_Achr1P24500_001 Banana endoplasmic reticulum, plasma membrane, vacuole 72.71 72.71
CDY70289 Canola extracellular 62.66 72.29
CDX85277 Canola extracellular 68.34 71.79
Os03t0754500-00 Rice extracellular 32.97 70.56
Zm00001d013256_P001 Maize extracellular 68.12 69.49
Os07t0604300-01 Rice extracellular 67.47 69.28
EER90860 Sorghum extracellular, golgi, plasma membrane 67.9 69.27
Os05t0386800-01 Rice extracellular 69.0 69.15
Zm00001d034049_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 67.69 68.58
GSMUA_Achr2P06240_001 Banana mitochondrion 70.52 67.71
CDY60470 Canola plasma membrane 67.25 67.25
CDY43250 Canola plasma membrane 66.81 66.96
EER97506 Sorghum extracellular, plasma membrane 66.59 66.59
EER90859 Sorghum extracellular 61.79 66.59
TraesCS6D01G364400.1 Wheat extracellular 64.85 66.44
TraesCS5D01G401900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 65.72 65.86
TraesCS5B01G396900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 65.72 65.86
TraesCS5A01G392000.1 Wheat endoplasmic reticulum, extracellular, golgi 65.72 65.86
TraesCS6A01G379800.1 Wheat extracellular 64.19 65.77
TraesCS6B01G418400.1 Wheat extracellular 63.97 65.55
CDY24004 Canola cytosol, nucleus, plastid 12.01 64.71
CDX90983 Canola extracellular 61.35 64.6
HORVU5Hr1G095910.12 Barley extracellular, vacuole 64.63 64.35
OQU92393 Sorghum extracellular 64.63 64.21
Zm00001d022081_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 64.19 63.91
Os03t0416300-01 Rice extracellular 63.32 63.32
CDY02181 Canola endoplasmic reticulum, extracellular 27.95 62.14
TraesCS4A01G231200.1 Wheat extracellular 62.23 61.96
TraesCS4D01G082700.1 Wheat extracellular 61.79 61.39
HORVU4Hr1G014530.1 Barley extracellular 62.01 61.34
CDX69511 Canola plasma membrane 60.92 61.32
CDX85543 Canola extracellular, plasma membrane, vacuole 60.92 61.18
TraesCS4B01G084800.1 Wheat extracellular 60.7 61.1
CDY26444 Canola plastid 48.69 60.93
TraesCS2A01G175100.1 Wheat extracellular 60.04 60.71
CDY58695 Canola extracellular 27.29 60.68
TraesCS2D01G182500.1 Wheat golgi 60.04 60.44
TraesCS3A01G409900.1 Wheat plastid 36.46 60.29
KRH56778 Soybean extracellular 27.07 59.33
HORVU2Hr1G033070.14 Barley mitochondrion 60.04 58.51
TraesCS2B01G201500.1 Wheat plasma membrane 58.52 58.39
Os10t0497700-01 Rice extracellular 53.93 58.12
TraesCS5D01G402000.1 Wheat extracellular 28.6 57.46
CDY29033 Canola cytosol 22.71 57.14
TraesCS5B01G397000.2 Wheat extracellular 28.17 56.83
TraesCS3B01G443000.1 Wheat cytosol, plasma membrane, vacuole 51.09 55.98
HORVU5Hr1G067940.1 Barley plasma membrane, plastid 57.21 55.51
HORVU5Hr1G096010.13 Barley endoplasmic reticulum 33.62 55.2
TraesCS3D01G404800.2 Wheat plasma membrane 52.84 52.95
CDX93481 Canola plasma membrane 47.38 49.43
CDY31063 Canola plasma membrane 46.51 49.08
CDY20671 Canola extracellular, plasma membrane, vacuole 46.51 46.81
CDY26445 Canola cytosol 16.38 44.38
CDY14723 Canola cytosol 28.38 40.88
CDX94950 Canola nucleus 44.1 35.44
CDX70627 Canola cytosol, nucleus, plasma membrane 61.57 32.87
CDX87194 Canola mitochondrion 14.41 31.58
CDY57659 Canola cytosol 7.21 21.57
CDY09102 Canola cytosol 12.23 21.46
CDY19626 Canola mitochondrion 18.34 20.39
CDY00037 Canola plasma membrane 26.42 18.28
CDY49611 Canola plasma membrane 26.42 18.28
CDY34424 Canola plasma membrane 26.2 18.21
CDY32210 Canola plasma membrane 26.2 18.18
CDX89278 Canola extracellular, golgi, vacuole 25.98 17.95
CDY36030 Canola vacuole 25.33 17.9
CDY52722 Canola endoplasmic reticulum, plasma membrane, vacuole 25.76 17.74
CDX97377 Canola endoplasmic reticulum, golgi, vacuole 25.55 17.59
CDY29275 Canola extracellular, plasma membrane, vacuole 25.55 17.59
CDY34980 Canola endoplasmic reticulum, plasma membrane, vacuole 25.55 17.54
CDX82237 Canola endoplasmic reticulum, vacuole 25.33 17.37
CDY14283 Canola endoplasmic reticulum, plasma membrane, vacuole 25.55 17.13
CDY55591 Canola plasma membrane 26.2 14.42
CDY43072 Canola plasma membrane 26.2 14.2
Protein Annotations
MapMan:21.1.2.2GO:A0A078FV36UniProt:A0A078FV36EnsemblPlants:CDY16831ProteinID:CDY16831ProteinID:CDY16831.1
InterPro:COBRA_plnGO:GO:0005575GO:GO:0008150GO:GO:0009987GO:GO:0010215GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016049GO:GO:0031225GO:GO:0040007EnsemblPlantsGene:GSBRNA2T00094716001
PFAM:PD140986PFAM:PF04833PIRSF:PIRSF038122PANTHER:PTHR31673PANTHER:PTHR31673:SF3SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI0004EED754SEG:seg:::
Description
BnaA09g05510DBnaA09g05510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV36]
Coordinates
chrLK032067:+:537198..540074
Molecular Weight (calculated)
51253.4 Da
IEP (calculated)
8.632
GRAVY (calculated)
-0.142
Length
458 amino acids
Sequence
(BLAST)
001: MESSVSRSTS VVSKMSFLAV LVVFLISSSY ITSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIPSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVLNSWVQ DPGNAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKVVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNKT ESGACLDPDT PHLASVVSPP TKKGTILPPL VQCTRHLCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYS QWNMVAQHPN FDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQATFS
401: FEKGWAFPRR IYFNGDNCVM PPPDTYPFLP NGGFRPEVSV FASVLLPVLL VFFFFFSA
Best Arabidopsis Sequence Match ( AT5G60920.1 )
(BLAST)
001: MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT
101: TEQGDCSKYK GNIPHCCKKD PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT LMGPGPGYTC GPAKIVRPTK
201: FVTTDTRRTT QAMMTWNITC TYSQFLAQRT PTCCVSLSSF YNETIVGCPT CACGCQNNRT ESGACLDPDT PHLASVVSPP TKKGTVLPPL VQCTRHMCPI
301: RVHWHVKQNY KEYWRVKITI TNFNYRLNYT QWNLVAQHPN LDNITQIFSF NYKSLTPYAG LNDTAMLWGV KFYNDFLSEA GPLGNVQSEI LFRKDQSTFT
401: FEKGWAFPRR IYFNGDNCVM PPPDSYPFLP NGGSRSQFSF VAAVLLPLLV FFFFSA
Arabidopsis Description
COBProtein COBRA [Source:UniProtKB/Swiss-Prot;Acc:Q94KT8]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.