Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020151.1-P | Field mustard | cytosol | 95.79 | 96.53 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 76.25 | 29.92 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 75.86 | 29.86 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 73.18 | 28.72 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.95 | 28.26 |
| AT4G27110.1 | Thale cress | extracellular | 68.58 | 26.8 |
| CDY19626 | Canola | mitochondrion | 40.23 | 25.49 |
| CDY36030 | Canola | vacuole | 59.39 | 23.92 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 59.77 | 23.35 |
| CDY57659 | Canola | cytosol | 13.03 | 22.22 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 49.81 | 21.14 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 52.11 | 20.8 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 51.34 | 20.46 |
| KRH27088 | Soybean | mitochondrion | 50.57 | 19.67 |
| PGSC0003DMT400002678 | Potato | vacuole | 49.81 | 19.67 |
| Zm00001d021661_P001 | Maize | mitochondrion | 50.96 | 19.62 |
| PGSC0003DMT400037398 | Potato | vacuole | 48.66 | 19.16 |
| CDY55591 | Canola | plasma membrane | 60.92 | 19.11 |
| KRH22248 | Soybean | golgi, vacuole | 48.66 | 19.07 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 48.28 | 18.78 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 47.13 | 18.75 |
| KXG36369 | Sorghum | mitochondrion | 48.28 | 18.72 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 48.28 | 18.69 |
| CDY43072 | Canola | plasma membrane | 60.15 | 18.58 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 47.89 | 18.55 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 47.51 | 18.45 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 47.51 | 18.4 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 46.36 | 18.2 |
| CDY32210 | Canola | plasma membrane | 45.98 | 18.18 |
| Os06t0685100-00 | Rice | plasma membrane | 47.51 | 18.16 |
| CDY00037 | Canola | plasma membrane | 45.59 | 17.98 |
| CDY34424 | Canola | plasma membrane | 45.21 | 17.91 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.59 | 17.89 |
| CDY49611 | Canola | plasma membrane | 45.21 | 17.82 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.21 | 17.69 |
| CDY26444 | Canola | plastid | 21.84 | 15.57 |
| CDY70289 | Canola | extracellular | 20.69 | 13.6 |
| CDX90983 | Canola | extracellular | 22.61 | 13.56 |
| CDX86358 | Canola | extracellular | 22.61 | 13.53 |
| CDX85277 | Canola | extracellular | 22.61 | 13.53 |
| CDX69511 | Canola | plasma membrane | 22.99 | 13.19 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 22.99 | 13.16 |
| CDY31063 | Canola | plasma membrane | 21.07 | 12.67 |
| CDX93481 | Canola | plasma membrane | 20.69 | 12.3 |
| CDX87193 | Canola | plasma membrane | 21.46 | 12.28 |
| CDY16831 | Canola | plasma membrane | 21.46 | 12.23 |
| CDY58695 | Canola | extracellular | 9.58 | 12.14 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 21.07 | 12.09 |
| CDY02184 | Canola | plasma membrane | 21.07 | 12.04 |
| CDY58691 | Canola | plasma membrane | 21.07 | 12.01 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 9.2 | 11.65 |
| CDY43250 | Canola | plasma membrane | 19.92 | 11.38 |
| CDY60470 | Canola | plasma membrane | 19.92 | 11.35 |
| CDY26445 | Canola | cytosol | 6.13 | 9.47 |
| CDX94950 | Canola | nucleus | 20.31 | 9.3 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 2.68 | 8.24 |
| CDY14723 | Canola | cytosol | 8.81 | 7.23 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 23.75 | 7.23 |
| CDY66895 | Canola | cytosol | 1.53 | 7.02 |
| CDY29033 | Canola | cytosol | 4.21 | 6.04 |
| CDX87194 | Canola | mitochondrion | 4.6 | 5.74 |
| PGSC0003DMT400002688 | Potato | cytosol | 0.0 | 0.0 |
| CDY42842 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY09102 | EnsemblPlantsGene:GSBRNA2T00001320001 | GO:A0A078F7M7 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| InterPro:COBRA_pln | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | PFAM:PD140986 | PFAM:PF04833 | ProteinID:CDY09102 |
| ProteinID:CDY09102.1 | SEG:seg | UniParc:UPI0004EE744E | UniProt:A0A078F7M7 | MapMan:35.1 | : |
Description
BnaA02g05280DBnaA02g05280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7M7]
Coordinates
chrLK031993:-:103740..105654
Molecular Weight (calculated)
29126.4 Da
IEP (calculated)
7.796
GRAVY (calculated)
-0.256
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSPFTACLS QKEDNSVVVD GGAVVEFFCL SISYGYCLES LESERLLYET KYLNVFFLHH QRNKNRIRSR NHNPSSLAQN RTAFFPPQHW KIDGIVNPQY
101: KSGPPVRVDP TGFPDPSGLQ ATTYAFASWQ VICNITKPKP KAARCCVSYS AFYNDSAIPC NTCACGCADI DTDTCNANAR QLLLPPDSLL VPFENRTLKA
201: KVWAKRKHMA FIKKLPCPDN CGISLNWHVN SDYADGWSAS VTVFNWGANA VEDWFAAVDL G
101: KSGPPVRVDP TGFPDPSGLQ ATTYAFASWQ VICNITKPKP KAARCCVSYS AFYNDSAIPC NTCACGCADI DTDTCNANAR QLLLPPDSLL VPFENRTLKA
201: KVWAKRKHMA FIKKLPCPDN CGISLNWHVN SDYADGWSAS VTVFNWGANA VEDWFAAVDL G
001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
Arabidopsis Description
COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.