Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 98.22 | 98.22 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 97.03 | 97.03 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 93.03 | 93.3 |
| KXG36369 | Sorghum | mitochondrion | 79.97 | 80.09 |
| Zm00001d021661_P001 | Maize | mitochondrion | 79.23 | 78.76 |
| Os06t0685100-00 | Rice | plasma membrane | 79.23 | 78.18 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 62.02 | 63.72 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 61.13 | 61.95 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 56.38 | 58.02 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 54.45 | 56.12 |
| CDY36030 | Canola | vacuole | 51.63 | 53.7 |
| Bra035768.1-P | Field mustard | mitochondrion, peroxisome, plastid | 29.97 | 53.16 |
| CDY19626 | Canola | mitochondrion | 32.49 | 53.16 |
| PGSC0003DMT400002678 | Potato | vacuole | 51.63 | 52.65 |
| Bra023941.1-P | Field mustard | plasma membrane | 52.37 | 52.53 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 51.93 | 52.4 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 52.23 | 52.38 |
| Bra001795.1-P | Field mustard | endoplasmic reticulum, vacuole | 51.78 | 52.25 |
| PGSC0003DMT400037398 | Potato | vacuole | 51.34 | 52.19 |
| AT4G27110.1 | Thale cress | extracellular | 51.63 | 52.1 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 47.33 | 51.87 |
| KRH27599 | Soybean | extracellular | 50.0 | 51.77 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 50.74 | 51.43 |
| Bra026378.1-P | Field mustard | extracellular, golgi, vacuole | 49.7 | 51.3 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 50.45 | 51.13 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 50.15 | 50.98 |
| Bra010411.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 49.85 | 50.68 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.04 | 50.37 |
| KRH77883 | Soybean | extracellular, plasma membrane, vacuole | 44.66 | 50.25 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 50.0 | 50.22 |
| KRH22248 | Soybean | golgi, vacuole | 48.37 | 48.95 |
| PGSC0003DMT400002688 | Potato | cytosol | 9.35 | 48.84 |
| KRH27088 | Soybean | mitochondrion | 47.92 | 48.14 |
| PGSC0003DMT400005270 | Potato | cytosol | 50.89 | 47.91 |
| CDY09102 | Canola | cytosol | 18.4 | 47.51 |
| TraesCS4B01G187300.1 | Wheat | golgi | 45.4 | 45.88 |
| Solyc02g080250.1.1 | Tomato | cytosol | 23.0 | 45.32 |
| Bra020151.1-P | Field mustard | cytosol | 17.36 | 45.17 |
| TraesCS2B01G107700.1 | Wheat | plasma membrane | 42.43 | 43.4 |
| CDY57659 | Canola | cytosol | 9.64 | 42.48 |
| CDY55591 | Canola | plasma membrane | 52.23 | 42.31 |
| CDY43072 | Canola | plasma membrane | 51.78 | 41.3 |
| TraesCS4B01G084800.1 | Wheat | extracellular | 18.69 | 27.69 |
| TraesCS6B01G418400.1 | Wheat | extracellular | 18.1 | 27.29 |
| TraesCS2B01G201500.1 | Wheat | plasma membrane | 18.1 | 26.58 |
| TraesCS2B01G201400.1 | Wheat | plasma membrane | 17.66 | 26.56 |
| TraesCS5B01G396900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 17.66 | 26.04 |
| TraesCS3B01G443000.1 | Wheat | cytosol, plasma membrane, vacuole | 16.02 | 25.84 |
| TraesCS6B01G361700.1 | Wheat | plastid | 8.46 | 25.79 |
| TraesCS6B01G185800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 15.73 | 25.54 |
| TraesCS5B01G397000.2 | Wheat | extracellular | 8.46 | 25.11 |
| TraesCS5B01G101400.1 | Wheat | extracellular | 16.17 | 24.22 |
| TraesCS2B01G406700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 12.31 | 19.35 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G037700.1 | EnsemblPlantsGene:TraesCS7B01G037700 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | InterPro:COBRA_pln |
| PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | PFAM:PD140986 | PFAM:PF04833 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | MapMan:21.1.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:36506822..36508926
Molecular Weight (calculated)
74999.1 Da
IEP (calculated)
9.041
GRAVY (calculated)
-0.318
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKAAPMPPR RRRWPAYLLA AAVVLAVVTA ARAQDYNNGD DEEEKPKPQL KAQEACNGAF LSYTFIERTK EFPHLKNATA QAYAFKAQAT VLNTMTTDLK
101: AWQMFVGFQQ QEILVSVSGA VLLDGTDFPA NVSGGVTFAG YPMADLLNSI DTAGDLTQIQ VQMDITGTQF GVKPPGKPMP KTIKLTNPGY RCPAPTHKDS
201: VMYVCCVKDP KFKAKKANST RYLPRQKADL TMAYDVLTSY GNKYVAQVTI DNWSPMSRLD NWNLTWEWKR GEFIEKMRGA YTLLKEGPAC VYSPAASYYK
301: DFDFTPVYNC EKRPVIVDLP PDREKDNDVG NLPFCCKNGT LLPPIMDESK SRAIFQLTVF KMPPDLNRTA LYPPSNWKIT GKLNPHYVCR QPIRVSPMEF
401: PDGSGLMSTT PAVASWQVAC HMTRPKKRAS KCCVSFSAYY NDSTVPCNTC ACGCGNDTAT CDADAHPILL PSEAMLVPFD NRTAKARAWA KIKHWRVPNP
501: MPCGDNCGVS INWHVMNNYK SGWSVRMTIF NWQDYTFKNW FAAVKMGQHY GGYENVYSFN GTRLDAPFNN TIFMQALPGL EFLEPITDGR TSAYPRLPGK
601: QQSVISFKKK DVPNINIPKG GGFPKRVYFD GEECALPHKL PSSARRRAGA PSLLQAVTGV VLVVIVALVD SSCL
101: AWQMFVGFQQ QEILVSVSGA VLLDGTDFPA NVSGGVTFAG YPMADLLNSI DTAGDLTQIQ VQMDITGTQF GVKPPGKPMP KTIKLTNPGY RCPAPTHKDS
201: VMYVCCVKDP KFKAKKANST RYLPRQKADL TMAYDVLTSY GNKYVAQVTI DNWSPMSRLD NWNLTWEWKR GEFIEKMRGA YTLLKEGPAC VYSPAASYYK
301: DFDFTPVYNC EKRPVIVDLP PDREKDNDVG NLPFCCKNGT LLPPIMDESK SRAIFQLTVF KMPPDLNRTA LYPPSNWKIT GKLNPHYVCR QPIRVSPMEF
401: PDGSGLMSTT PAVASWQVAC HMTRPKKRAS KCCVSFSAYY NDSTVPCNTC ACGCGNDTAT CDADAHPILL PSEAMLVPFD NRTAKARAWA KIKHWRVPNP
501: MPCGDNCGVS INWHVMNNYK SGWSVRMTIF NWQDYTFKNW FAAVKMGQHY GGYENVYSFN GTRLDAPFNN TIFMQALPGL EFLEPITDGR TSAYPRLPGK
601: QQSVISFKKK DVPNINIPKG GGFPKRVYFD GEECALPHKL PSSARRRAGA PSLLQAVTGV VLVVIVALVD SSCL
001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD
Arabidopsis Description
COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.