Factsheet for TraesCS6B01G361700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G330900.1	Wheat	extracellular, plasma membrane	91.86	48.8
TraesCS6B01G185800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	63.8	33.98
TraesCS2B01G406700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	53.39	27.51
GSMUA_Achr4P27070_001	Banana	cytosol	49.32	26.33
Bra019992.1-P	Field mustard	cytosol	44.8	24.94
VIT_12s0035g00630.t01	Wine grape	extracellular, plasma membrane	47.96	24.59
TraesCS5B01G101400.1	Wheat	extracellular	48.87	24.0
Solyc01g103860.2.1	Tomato	cytosol	45.7	23.88
Bra030800.1-P	Field mustard	cytosol	44.34	23.5
CDX93481	Canola	plasma membrane	46.15	23.23
TraesCS2B01G201400.1	Wheat	plasma membrane	47.06	23.21
CDY31063	Canola	plasma membrane	45.25	23.04
TraesCS3B01G443000.1	Wheat	cytosol, plasma membrane, vacuole	42.99	22.73
AT1G09790.1	Thale cress	plasma membrane	46.15	22.47
TraesCS6B01G418400.1	Wheat	extracellular	45.25	22.37
CDY20671	Canola	extracellular, plasma membrane, vacuole	45.7	22.2
TraesCS5B01G396900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.25	21.88
TraesCS2B01G201500.1	Wheat	plasma membrane	44.8	21.57
TraesCS4B01G084800.1	Wheat	extracellular	44.34	21.54
CDX94950	Canola	nucleus	46.15	17.89
TraesCS7B01G037700.1	Wheat	mitochondrion	25.79	8.46
TraesCS4B01G187300.1	Wheat	golgi	23.08	7.65
TraesCS2B01G107700.1	Wheat	plasma membrane	20.81	6.98
TraesCS5B01G397000.2	Wheat	extracellular	0.9	0.88

Protein Annotations

EnsemblPlants:TraesCS6B01G361700.1	EnsemblPlantsGene:TraesCS6B01G361700	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987	GO:GO:0010215
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007	InterPro:COBRA_pln
PANTHER:PTHR31673	PANTHER:PTHR31673:SF12	SEG:seg	MapMan:21.1.2.2	:	:

Description

No Description!

Coordinates

chr6B:-:633054625..633057928

Molecular Weight (calculated)

25083.0 Da

IEP (calculated)

8.159

GRAVY (calculated)

-0.197

Length

221 amino acids

Sequence
(BLAST)

001: MTWQVTCSYS QTAVGPFRSC CVCLSTFYSR TIVECPDCTC GACPARTSTA PQCQDAEIRC TGHMCPIRVH WHIKKRYTEY WRVKLSINNF NRFKNFTDWN
101: LVFQHQSLQE LTQVLSFAYE PLVQRSTIND TGLFWGLPSF NQMLPQDGTV QTEVLLRKGK DFSFSGGWAL PRKIYFDGSE CTMPPPDDFP QLPSSSPVQR
201: FSGGHRWLAS GAVLVLGLLL T

Best Arabidopsis Sequence Match ( AT3G02210.1 )
(BLAST)

001: MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ
101: GDCSKFKGTI PHCCKKTPSV VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA PGPGYTCSPA KIVKPTRFIG
201: TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK TIVSCPTCSC GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH
301: VKVNYKQYWR VKVTITNFNY NMNYSQWNLV VQHPNFDNLT QTFSFNYKPL TPYASINDTG ILWGIKFYND LLMQAGPFGN VQSELLFQKE ASAFTFEKGW
401: AFPRRIYFNG DNCVMPPPDS YPWLPNTGSH KSVGSLFAAM ALLLIVFLHG NL

Arabidopsis Description

COBL1COBL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VHK7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.