Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31063 | Canola | plasma membrane | 89.01 | 93.32 |
| CDX93481 | Canola | plasma membrane | 77.14 | 79.95 |
| AT1G09790.1 | Thale cress | plasma membrane | 73.85 | 74.01 |
| CDX94950 | Canola | nucleus | 70.55 | 56.32 |
| CDY42842 | Canola | cytosol | 14.95 | 55.74 |
| Solyc01g103860.2.1 | Tomato | cytosol | 51.21 | 55.08 |
| VIT_12s0035g00630.t01 | Wine grape | extracellular, plasma membrane | 50.99 | 53.83 |
| GSMUA_Achr4P27070_001 | Banana | cytosol | 48.57 | 53.38 |
| CDY70289 | Canola | extracellular | 44.18 | 50.63 |
| CDX86358 | Canola | extracellular | 48.13 | 50.23 |
| CDX85277 | Canola | extracellular | 48.13 | 50.23 |
| TraesCS2A01G388600.1 | Wheat | extracellular, plasma membrane | 40.44 | 49.33 |
| Zm00001d002803_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 47.25 | 49.31 |
| CDY66895 | Canola | cytosol | 6.15 | 49.12 |
| KXG26803 | Sorghum | extracellular, plasma membrane | 47.91 | 48.77 |
| TraesCS2D01G386400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 46.81 | 48.19 |
| CDY43250 | Canola | plasma membrane | 47.69 | 47.48 |
| CDY60470 | Canola | plasma membrane | 47.69 | 47.38 |
| CDX90983 | Canola | extracellular | 45.05 | 47.13 |
| TraesCS6A01G158000.1 | Wheat | endoplasmic reticulum | 36.04 | 47.13 |
| CDY02184 | Canola | plasma membrane | 46.81 | 46.61 |
| CDY16831 | Canola | plasma membrane | 46.81 | 46.51 |
| CDY58691 | Canola | plasma membrane | 46.81 | 46.51 |
| CDX87193 | Canola | plasma membrane | 46.59 | 46.49 |
| Os04t0540300-00 | Rice | plasma membrane | 44.62 | 46.24 |
| TraesCS6A01G330900.1 | Wheat | extracellular, plasma membrane | 41.98 | 45.91 |
| TraesCS6B01G185800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 41.76 | 45.78 |
| TraesCS6B01G361700.1 | Wheat | plastid | 22.2 | 45.7 |
| CDY26444 | Canola | plastid | 36.26 | 45.08 |
| CDX69511 | Canola | plasma membrane | 45.05 | 45.05 |
| CDY26445 | Canola | cytosol | 16.7 | 44.97 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 45.05 | 44.96 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 8.35 | 44.71 |
| TraesCS2B01G406700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 37.14 | 39.39 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 16.26 | 35.92 |
| CDY58695 | Canola | extracellular | 16.26 | 35.92 |
| CDY29033 | Canola | cytosol | 13.85 | 34.62 |
| HORVU2Hr1G092510.1 | Barley | mitochondrion | 18.9 | 26.88 |
| CDY14723 | Canola | cytosol | 18.02 | 25.79 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 45.49 | 24.13 |
| CDY09102 | Canola | cytosol | 12.09 | 21.07 |
| CDY57659 | Canola | cytosol | 7.03 | 20.91 |
| CDY19626 | Canola | mitochondrion | 18.02 | 19.9 |
| CDX87194 | Canola | mitochondrion | 9.01 | 19.62 |
| CDY32210 | Canola | plasma membrane | 26.59 | 18.33 |
| CDY34424 | Canola | plasma membrane | 26.15 | 18.06 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.93 | 17.74 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.49 | 17.39 |
| CDY49611 | Canola | plasma membrane | 25.27 | 17.37 |
| CDY00037 | Canola | plasma membrane | 25.27 | 17.37 |
| CDY36030 | Canola | vacuole | 24.4 | 17.13 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 24.4 | 16.62 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 24.18 | 16.54 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 23.96 | 16.44 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 23.96 | 16.39 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.74 | 15.81 |
| CDY55591 | Canola | plasma membrane | 25.49 | 13.94 |
| CDY43072 | Canola | plasma membrane | 25.27 | 13.61 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078G5E1 | UniProt:A0A078G5E1 | EnsemblPlants:CDY20671 | ProteinID:CDY20671 | ProteinID:CDY20671.1 |
| InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 | EnsemblPlantsGene:GSBRNA2T00012858001 | PFAM:PD140986 |
| PFAM:PF04833 | PIRSF:PIRSF038122 | PANTHER:PTHR31673 | PANTHER:PTHR31673:SF12 | SignalP:SignalP-noTM | UniParc:UPI0004EEE525 |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g13870DBnaC08g13870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5E1]
Coordinates
chrLK032110:+:597233..600305
Molecular Weight (calculated)
51060.1 Da
IEP (calculated)
7.168
GRAVY (calculated)
-0.153
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKLLFAITT ILFTISPSTH GFDPLDPCGE MIIKWDLLHS SPGHHTCPNL QLEIEEVNSN VCFSILSQVL VKIENKQEYR HVEKPGWKLS WHWVNKTVIW
101: DMRGAETTEQ GNCSAFASSE TLPHCCLRRP TIVDLLPGAP FNMQVSNCCR GGVLTSMSQD RINHVSAFHM TIGNFPDDPG EFTMPCDFDI GVPGYTCSNA
201: TSVDPSKYST DKGRRKTQAL ATWEAECVYS QTKSSQSPKC CVSLSAFYYQ NIVPCPTCSC GCSSSNCVKP GVVPSLLEQK HDPHVEVSPV VQCTNHMCPI
301: HIHWHVKVNY KKYWRVKITA TNLNTMRNYS DWNLVVLHPN LNNVTQVFSF NYKPMTPLHK SINDTGMFWG LKFYNDVLLQ AGELGNVQTE ILLGKDIGNF
401: TFKNGWAFPR RILFNGDECV MPSPDDYPRL PNSASSSSGV SSFVSFVFCF LLLLV
101: DMRGAETTEQ GNCSAFASSE TLPHCCLRRP TIVDLLPGAP FNMQVSNCCR GGVLTSMSQD RINHVSAFHM TIGNFPDDPG EFTMPCDFDI GVPGYTCSNA
201: TSVDPSKYST DKGRRKTQAL ATWEAECVYS QTKSSQSPKC CVSLSAFYYQ NIVPCPTCSC GCSSSNCVKP GVVPSLLEQK HDPHVEVSPV VQCTNHMCPI
301: HIHWHVKVNY KKYWRVKITA TNLNTMRNYS DWNLVVLHPN LNNVTQVFSF NYKPMTPLHK SINDTGMFWG LKFYNDVLLQ AGELGNVQTE ILLGKDIGNF
401: TFKNGWAFPR RILFNGDECV MPSPDDYPRL PNSASSSSGV SSFVSFVFCF LLLLV
001: MGAMLNLLLV VTVILCSILS PTHGYDPLDP FGKIIIKWDL LLSSPGQHHV QVTLENMQEY RHVEKPGWKL SWHWLNQEVI WDMKGAETTE QGNCSAFASS
101: GNLPHCCLER PTIVDLLPGA SLNVQVANCC RGGVLTSMSQ DHANHVSAFH MTVGSSPDGP EEFNMPSNFD IGVPGYSCDN ATSVSPTKFS TDKGRRKTQA
201: LATWEAVCVY SQFRSSPSPK CCVSLSAFYY QNIVPCPTCS CGCSSSHCVK DGELPPYLEQ KHDPDEEVSP VVKCSDHMCP IRIHWHVKVN YREYWRVKIT
301: ATNFNTMKNY TNWNLVVLHP NLKSVQQVFS FNYKSLTPYQ NSINDTGMFW GVQFYNDVLL QEGKIGNVQT ELLLKKDMGN FTFREGWAFP RRILFNGDEC
401: VMPSPDDFPR LPKSAHSSSS SSAVISSVSV VFCFLLHHLL LLV
101: GNLPHCCLER PTIVDLLPGA SLNVQVANCC RGGVLTSMSQ DHANHVSAFH MTVGSSPDGP EEFNMPSNFD IGVPGYSCDN ATSVSPTKFS TDKGRRKTQA
201: LATWEAVCVY SQFRSSPSPK CCVSLSAFYY QNIVPCPTCS CGCSSSHCVK DGELPPYLEQ KHDPDEEVSP VVKCSDHMCP IRIHWHVKVN YREYWRVKIT
301: ATNFNTMKNY TNWNLVVLHP NLKSVQQVFS FNYKSLTPYQ NSINDTGMFW GVQFYNDVLL QEGKIGNVQT ELLLKKDMGN FTFREGWAFP RRILFNGDEC
401: VMPSPDDFPR LPKSAHSSSS SSAVISSVSV VFCFLLHHLL LLV
Arabidopsis Description
COBL6COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.