Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG26803 | Sorghum | extracellular, plasma membrane | 84.86 | 82.77 |
| Os04t0540300-00 | Rice | plasma membrane | 63.53 | 63.1 |
| TraesCS2A01G388600.1 | Wheat | extracellular, plasma membrane | 53.44 | 62.47 |
| TraesCS2D01G386400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 61.7 | 60.86 |
| GSMUA_Achr4P27070_001 | Banana | cytosol | 54.36 | 57.25 |
| TraesCS2B01G406700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 51.61 | 52.45 |
| Solyc01g103860.2.1 | Tomato | cytosol | 50.46 | 52.01 |
| VIT_12s0035g00630.t01 | Wine grape | extracellular, plasma membrane | 50.46 | 51.04 |
| Bra030800.1-P | Field mustard | cytosol | 48.62 | 50.84 |
| CDX93481 | Canola | plasma membrane | 49.54 | 49.2 |
| Zm00001d022081_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 51.61 | 48.91 |
| Zm00001d031479_P001 | Maize | cytosol, mitochondrion | 18.12 | 48.17 |
| CDY31063 | Canola | plasma membrane | 47.94 | 48.16 |
| Bra019992.1-P | Field mustard | cytosol | 43.81 | 48.11 |
| Zm00001d047276_P001 | Maize | plasma membrane | 49.54 | 48.0 |
| AT1G09790.1 | Thale cress | plasma membrane | 49.77 | 47.8 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 49.31 | 47.25 |
| Zm00001d013256_P001 | Maize | extracellular | 48.62 | 47.22 |
| Zm00001d034049_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 48.85 | 47.12 |
| Zm00001d022082_P001 | Maize | extracellular, plasma membrane, vacuole | 46.79 | 45.64 |
| CDX94950 | Canola | nucleus | 45.64 | 34.91 |
| HORVU2Hr1G092510.1 | Barley | mitochondrion | 25.46 | 34.69 |
| Zm00001d007208_P001 | Maize | extracellular, plasma membrane, vacuole | 26.15 | 17.43 |
| Zm00001d028826_P001 | Maize | plasma membrane | 25.46 | 16.64 |
| Zm00001d021661_P001 | Maize | mitochondrion | 24.08 | 15.49 |
Protein Annotations
| EntrezGene:103646135 | MapMan:21.1.2.2 | UniProt:A0A1D6E4F4 | InterPro:COBRA_pln | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 |
| GO:GO:0040007 | ProteinID:ONM15390.1 | PFAM:PD140986 | PFAM:PF04833 | PIRSF:PIRSF038122 | PANTHER:PTHR31673 |
| PANTHER:PTHR31673:SF12 | SignalP:SignalP-noTM | UniParc:UPI0004DE8A44 | EnsemblPlantsGene:Zm00001d002803 | EnsemblPlants:Zm00001d002803_P001 | EnsemblPlants:Zm00001d002803_T001 |
| SEG:seg | : | : | : | : | : |
Description
Brittle stalk-2-like protein 9
Coordinates
chr2:-:23171752..23174036
Molecular Weight (calculated)
49105.5 Da
IEP (calculated)
7.062
GRAVY (calculated)
-0.182
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRFVFVLLI LMCCSSSRFT GAYDPIDPNG NITIVWDFQS LDVAGMTPYT VMVSIHNYQM YRHIERPGWR LSWSWAGKEV IWSTTGAETT EQGDCSRVGS
101: GGSRPHCCQK RPVMVDLPPG TPYNMQVANC CRGGVLSSLV QSDLTSAAAF QMVVGEFALA RDSGGKEPEK PWQFDMGVPG YTCSNATTVA PTRIKVDKNR
201: YVQALLTWQV TCSYSQYRAS AAPSCCVSMT TFYSETIVDC PRCSCGCQGS PPSPQCVSVD QQQPWLPAVG DDEPSSAPIV WCSEHMCPIR VHWHVKTNYR
301: KYWRVKVTVS NYNLARNYSD WNLVLQHPNL RSLTQLFSFN YRPLVEYGAY NDTGMFWGLR YYNEMLLQDG NVQSEMILEK ESDFTYSGGW AFPRRVYFNG
401: QECVMPPADQ YPVLPNGASA LRGHFCFLLL LFFVVV
101: GGSRPHCCQK RPVMVDLPPG TPYNMQVANC CRGGVLSSLV QSDLTSAAAF QMVVGEFALA RDSGGKEPEK PWQFDMGVPG YTCSNATTVA PTRIKVDKNR
201: YVQALLTWQV TCSYSQYRAS AAPSCCVSMT TFYSETIVDC PRCSCGCQGS PPSPQCVSVD QQQPWLPAVG DDEPSSAPIV WCSEHMCPIR VHWHVKTNYR
301: KYWRVKVTVS NYNLARNYSD WNLVLQHPNL RSLTQLFSFN YRPLVEYGAY NDTGMFWGLR YYNEMLLQDG NVQSEMILEK ESDFTYSGGW AFPRRVYFNG
401: QECVMPPADQ YPVLPNGASA LRGHFCFLLL LFFVVV
001: MGAMLNLLLV VTVILCSILS PTHGYDPLDP FGKIIIKWDL LLSSPGQHHV QVTLENMQEY RHVEKPGWKL SWHWLNQEVI WDMKGAETTE QGNCSAFASS
101: GNLPHCCLER PTIVDLLPGA SLNVQVANCC RGGVLTSMSQ DHANHVSAFH MTVGSSPDGP EEFNMPSNFD IGVPGYSCDN ATSVSPTKFS TDKGRRKTQA
201: LATWEAVCVY SQFRSSPSPK CCVSLSAFYY QNIVPCPTCS CGCSSSHCVK DGELPPYLEQ KHDPDEEVSP VVKCSDHMCP IRIHWHVKVN YREYWRVKIT
301: ATNFNTMKNY TNWNLVVLHP NLKSVQQVFS FNYKSLTPYQ NSINDTGMFW GVQFYNDVLL QEGKIGNVQT ELLLKKDMGN FTFREGWAFP RRILFNGDEC
401: VMPSPDDFPR LPKSAHSSSS SSAVISSVSV VFCFLLHHLL LLV
101: GNLPHCCLER PTIVDLLPGA SLNVQVANCC RGGVLTSMSQ DHANHVSAFH MTVGSSPDGP EEFNMPSNFD IGVPGYSCDN ATSVSPTKFS TDKGRRKTQA
201: LATWEAVCVY SQFRSSPSPK CCVSLSAFYY QNIVPCPTCS CGCSSSHCVK DGELPPYLEQ KHDPDEEVSP VVKCSDHMCP IRIHWHVKVN YREYWRVKIT
301: ATNFNTMKNY TNWNLVVLHP NLKSVQQVFS FNYKSLTPYQ NSINDTGMFW GVQFYNDVLL QEGKIGNVQT ELLLKKDMGN FTFREGWAFP RRILFNGDEC
401: VMPSPDDFPR LPKSAHSSSS SSAVISSVSV VFCFLLHHLL LLV
Arabidopsis Description
COBL6COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.