Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93481 | Canola | plasma membrane | 66.49 | 86.33 |
| CDY31063 | Canola | plasma membrane | 56.67 | 74.42 |
| AT1G09790.1 | Thale cress | plasma membrane | 59.12 | 74.23 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 56.32 | 70.55 |
| Solyc01g103860.2.1 | Tomato | cytosol | 40.35 | 54.37 |
| CDY42842 | Canola | cytosol | 11.23 | 52.46 |
| VIT_12s0035g00630.t01 | Wine grape | extracellular, plasma membrane | 39.3 | 51.97 |
| GSMUA_Achr4P27070_001 | Banana | cytosol | 37.54 | 51.69 |
| CDX86358 | Canola | extracellular | 36.14 | 47.25 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 7.02 | 47.06 |
| CDX85277 | Canola | extracellular | 35.96 | 47.02 |
| TraesCS6B01G361700.1 | Wheat | plastid | 17.89 | 46.15 |
| TraesCS6A01G158000.1 | Wheat | endoplasmic reticulum | 28.07 | 45.98 |
| KXG26803 | Sorghum | extracellular, plasma membrane | 35.96 | 45.86 |
| CDY70289 | Canola | extracellular | 31.93 | 45.84 |
| Zm00001d002803_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 34.91 | 45.64 |
| Os04t0540300-00 | Rice | plasma membrane | 35.09 | 45.56 |
| CDX90983 | Canola | extracellular | 34.74 | 45.52 |
| CDY26444 | Canola | plastid | 28.95 | 45.08 |
| TraesCS2D01G386400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.74 | 44.8 |
| TraesCS2A01G388600.1 | Wheat | extracellular, plasma membrane | 29.12 | 44.5 |
| CDY16831 | Canola | plasma membrane | 35.44 | 44.1 |
| TraesCS6B01G185800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 32.11 | 44.1 |
| CDY43250 | Canola | plasma membrane | 35.26 | 43.98 |
| CDY60470 | Canola | plasma membrane | 35.26 | 43.89 |
| CDX87193 | Canola | plasma membrane | 35.09 | 43.86 |
| CDY66895 | Canola | cytosol | 4.39 | 43.86 |
| CDY02184 | Canola | plasma membrane | 35.09 | 43.76 |
| TraesCS6A01G330900.1 | Wheat | extracellular, plasma membrane | 31.93 | 43.75 |
| CDY58691 | Canola | plasma membrane | 34.91 | 43.45 |
| CDX69511 | Canola | plasma membrane | 34.56 | 43.3 |
| CDY26445 | Canola | cytosol | 12.81 | 43.2 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 34.39 | 42.98 |
| TraesCS2B01G406700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 27.89 | 37.06 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 11.93 | 33.01 |
| CDY58695 | Canola | extracellular | 11.93 | 33.01 |
| CDY29033 | Canola | cytosol | 10.53 | 32.97 |
| CDY14723 | Canola | cytosol | 14.39 | 25.79 |
| CDY57659 | Canola | cytosol | 6.49 | 24.18 |
| HORVU2Hr1G092510.1 | Barley | mitochondrion | 12.98 | 23.12 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 34.56 | 22.96 |
| CDY09102 | Canola | cytosol | 9.3 | 20.31 |
| CDY19626 | Canola | mitochondrion | 14.39 | 19.9 |
| CDY32210 | Canola | plasma membrane | 20.18 | 17.42 |
| CDY34424 | Canola | plasma membrane | 19.82 | 17.15 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.0 | 17.14 |
| CDY00037 | Canola | plasma membrane | 19.82 | 17.07 |
| CDY49611 | Canola | plasma membrane | 19.65 | 16.92 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 19.3 | 16.54 |
| CDY36030 | Canola | vacuole | 18.77 | 16.51 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 19.3 | 16.49 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 19.12 | 16.39 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 19.12 | 16.32 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 18.95 | 16.29 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 19.12 | 15.96 |
| CDX87194 | Canola | mitochondrion | 5.44 | 14.83 |
| CDY55591 | Canola | plasma membrane | 19.82 | 13.58 |
| CDY43072 | Canola | plasma membrane | 19.65 | 13.25 |
Protein Annotations
| MapMan:21.1.2.2 | GO:A0A078E029 | EnsemblPlants:CDX94950 | ProteinID:CDX94950 | ProteinID:CDX94950.1 | InterPro:COBRA_pln |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00100434001 | InterPro:Metalloenzyme | PFAM:PD140986 | PFAM:PF01676 | PFAM:PF04833 |
| PANTHER:PTHR31673 | PANTHER:PTHR31673:SF12 | UniParc:UPI0004EE3A11 | SEG:seg | : | : |
Description
BnaC05g07210D
Coordinates
chrLK031886:+:320439..323174
Molecular Weight (calculated)
64556.4 Da
IEP (calculated)
9.332
GRAVY (calculated)
-0.538
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLTKIELRC DKRSRRRRAR APPAPERSGN RVTSIIVPGR KRLGRTRQKT LTMCQVQVKL ENMQEYRHID KPGWKLSWHW ESKQVIWDMR GAETTEQGNC
101: SAFASSGTLP HCCLRRPTIV DLLPGSPFNS QVSNCCRGGV LTSMSQDRTN HVSVFHMTIG SFPDDSGEFT MPSNFDIGVP GYSCDNATSV TPTKYSTDKG
201: RRKTQALATW EAVCVYSQFR SSQSPKCCVS LSAFYYRNIV PCPTCSCGCS SSHCVKPGEM PPYLEQKHDP EEEVTPVVEC TKHMCPIHIH WHVKVNYREY
301: WRVKITATNL NTMKNYTDWN LVVLHPNLKS VEQVFSFNYK SLTPYHNGIN DTGMFWGVKF YNDVLLQAGK IGNVQTELLL KKDMGNFSFR EGWAFPRRIL
401: FNGDECVMPS PDDYPRLPSY ASSAASSFAT TLKNNFEKLE QYVEIPSDSG ISFIVQPKMK ALEIAEKARD TNRAILSGKF DQDMVKEGSQ PALDKGGKLQ
501: ILTSHTLKPV PIAIGDPGLS QGKITSESIK VKAKRELKLR LCFHLRKLKR RLSREEIQKV PDATEEPETS
101: SAFASSGTLP HCCLRRPTIV DLLPGSPFNS QVSNCCRGGV LTSMSQDRTN HVSVFHMTIG SFPDDSGEFT MPSNFDIGVP GYSCDNATSV TPTKYSTDKG
201: RRKTQALATW EAVCVYSQFR SSQSPKCCVS LSAFYYRNIV PCPTCSCGCS SSHCVKPGEM PPYLEQKHDP EEEVTPVVEC TKHMCPIHIH WHVKVNYREY
301: WRVKITATNL NTMKNYTDWN LVVLHPNLKS VEQVFSFNYK SLTPYHNGIN DTGMFWGVKF YNDVLLQAGK IGNVQTELLL KKDMGNFSFR EGWAFPRRIL
401: FNGDECVMPS PDDYPRLPSY ASSAASSFAT TLKNNFEKLE QYVEIPSDSG ISFIVQPKMK ALEIAEKARD TNRAILSGKF DQDMVKEGSQ PALDKGGKLQ
501: ILTSHTLKPV PIAIGDPGLS QGKITSESIK VKAKRELKLR LCFHLRKLKR RLSREEIQKV PDATEEPETS
001: MGAMLNLLLV VTVILCSILS PTRFMIMIDK MVADGYDPLD PFGKIIIKWD LLLSSPGQHH VQVTLENMQE YRHVEKPGWK LSWHWLNQEV IWDMKGAETT
101: EQGNCSAFAS SGNLPHCCLE RPTIVDLLPG ASLNVQVANC CRGGVLTSMS QDHANHVSAF HMTVGSSPDG PEEFNMPSNF DIGVPGYSCD NATSVSPTKF
201: STDKGRRKTQ ALATWEAVCV YSQFRSSPSP KCCVSLSAFY YQNIVPCPTC SCGCSSSHCV KDGELPPYLE QKHDPDEEVS PVVKCSDHMC PIRIHWHVKV
301: NYREYWRVKI TATNFNTMKN YTNWNLVVLH PNLKSVQQVF SFNYKSLTPY QNSINDTGMF WGVQFYNDVL LQEGKIGNVQ TELLLKKDMG NFTFREGWAF
401: PRRILFNGDE CVMPSPDDFP RLPKSAHSSS SSSAVISSVS VVFCFLLHHL LLLV
101: EQGNCSAFAS SGNLPHCCLE RPTIVDLLPG ASLNVQVANC CRGGVLTSMS QDHANHVSAF HMTVGSSPDG PEEFNMPSNF DIGVPGYSCD NATSVSPTKF
201: STDKGRRKTQ ALATWEAVCV YSQFRSSPSP KCCVSLSAFY YQNIVPCPTC SCGCSSSHCV KDGELPPYLE QKHDPDEEVS PVVKCSDHMC PIRIHWHVKV
301: NYREYWRVKI TATNFNTMKN YTNWNLVVLH PNLKSVQQVF SFNYKSLTPY QNSINDTGMF WGVQFYNDVL LQEGKIGNVQ TELLLKKDMG NFTFREGWAF
401: PRRILFNGDE CVMPSPDDFP RLPKSAHSSS SSSAVISSVS VVFCFLLHHL LLLV
Arabidopsis Description
COBL6COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.