Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035768.1-P | Field mustard | mitochondrion, peroxisome, plastid | 71.84 | 77.89 |
| CDY57659 | Canola | cytosol | 23.54 | 63.4 |
| CDY36030 | Canola | vacuole | 84.47 | 53.7 |
| CDX82237 | Canola | endoplasmic reticulum, vacuole | 84.22 | 51.95 |
| AT3G20580.1 | Thale cress | endoplasmic reticulum, vacuole | 83.74 | 51.34 |
| PGSC0003DMT400002688 | Potato | cytosol | 15.53 | 49.61 |
| CDY55591 | Canola | plasma membrane | 85.19 | 42.19 |
| CDY43072 | Canola | plasma membrane | 84.22 | 41.07 |
| CDX97377 | Canola | endoplasmic reticulum, golgi, vacuole | 66.26 | 41.05 |
| CDY29275 | Canola | extracellular, plasma membrane, vacuole | 66.02 | 40.9 |
| CDX89278 | Canola | extracellular, golgi, vacuole | 65.29 | 40.57 |
| CDY14283 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.75 | 40.26 |
| CDY09102 | Canola | cytosol | 25.49 | 40.23 |
| VIT_19s0177g00160.t01 | Wine grape | plasma membrane | 61.16 | 38.47 |
| PGSC0003DMT400002678 | Potato | vacuole | 61.65 | 38.43 |
| VIT_10s0116g00620.t01 | Wine grape | extracellular | 60.68 | 38.23 |
| Solyc07g064200.2.1 | Tomato | extracellular, golgi, vacuole | 56.07 | 37.56 |
| PGSC0003DMT400037398 | Potato | vacuole | 58.01 | 36.05 |
| KRH22248 | Soybean | golgi, vacuole | 58.25 | 36.04 |
| Solyc10g006450.2.1 | Tomato | golgi, plasma membrane, vacuole | 58.5 | 35.92 |
| KRH27088 | Soybean | mitochondrion | 57.52 | 35.32 |
| GSMUA_Achr3P21560_001 | Banana | plasma membrane | 56.07 | 35.21 |
| GSMUA_Achr4P33540_001 | Banana | vacuole | 56.07 | 34.74 |
| KXG36369 | Sorghum | mitochondrion | 54.13 | 33.14 |
| TraesCS7A01G136600.1 | Wheat | mitochondrion | 53.64 | 32.79 |
| TraesCS7D01G136500.1 | Wheat | mitochondrion | 53.64 | 32.79 |
| HORVU7Hr1G028350.1 | Barley | golgi, mitochondrion, plasma membrane | 53.4 | 32.74 |
| CDY34424 | Canola | plasma membrane | 52.18 | 32.63 |
| Zm00001d021661_P001 | Maize | mitochondrion | 53.64 | 32.6 |
| CDY32210 | Canola | plasma membrane | 52.18 | 32.58 |
| TraesCS7B01G037700.1 | Wheat | mitochondrion | 53.16 | 32.49 |
| Os06t0685100-00 | Rice | plasma membrane | 52.43 | 31.63 |
| CDY00037 | Canola | plasma membrane | 48.79 | 30.36 |
| CDY49611 | Canola | plasma membrane | 48.79 | 30.36 |
| CDY66895 | Canola | cytosol | 4.13 | 29.82 |
| CDY52722 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 48.06 | 29.77 |
| CDY34980 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 46.6 | 28.79 |
| CDX90983 | Canola | extracellular | 22.82 | 21.61 |
| CDY26444 | Canola | plastid | 19.17 | 21.58 |
| CDY24004 | Canola | cytosol, nucleus, plastid | 4.37 | 21.18 |
| CDX85543 | Canola | extracellular, plasma membrane, vacuole | 23.06 | 20.83 |
| CDX69511 | Canola | plasma membrane | 22.57 | 20.44 |
| CDY58695 | Canola | extracellular | 10.19 | 20.39 |
| CDY26445 | Canola | cytosol | 8.25 | 20.12 |
| CDY02181 | Canola | endoplasmic reticulum, extracellular | 9.95 | 19.9 |
| CDX93481 | Canola | plasma membrane | 20.87 | 19.59 |
| CDY31063 | Canola | plasma membrane | 20.39 | 19.35 |
| CDY70289 | Canola | extracellular | 18.45 | 19.14 |
| CDX87193 | Canola | plasma membrane | 20.39 | 18.42 |
| CDY02184 | Canola | plasma membrane | 20.39 | 18.38 |
| CDY16831 | Canola | plasma membrane | 20.39 | 18.34 |
| CDY58691 | Canola | plasma membrane | 20.39 | 18.34 |
| CDY43250 | Canola | plasma membrane | 20.15 | 18.16 |
| CDX86358 | Canola | extracellular | 19.17 | 18.12 |
| CDX85277 | Canola | extracellular | 19.17 | 18.12 |
| CDY42842 | Canola | cytosol | 5.34 | 18.03 |
| CDY20671 | Canola | extracellular, plasma membrane, vacuole | 19.9 | 18.02 |
| CDY60470 | Canola | plasma membrane | 19.9 | 17.9 |
| CDY29033 | Canola | cytosol | 7.77 | 17.58 |
| CDX94950 | Canola | nucleus | 19.9 | 14.39 |
| CDY14723 | Canola | cytosol | 10.44 | 13.52 |
| CDX70627 | Canola | cytosol, nucleus, plasma membrane | 22.33 | 10.72 |
| CDX87194 | Canola | mitochondrion | 4.61 | 9.09 |
Protein Annotations
| EnsemblPlants:CDY19626 | EnsemblPlantsGene:GSBRNA2T00009299001 | GO:A0A078G2T9 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0010215 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0031225 | GO:GO:0040007 |
| InterPro:COBRA_pln | PANTHER:PTHR31052 | PANTHER:PTHR31052:SF2 | PFAM:PD140986 | PFAM:PF04833 | ProteinID:CDY19626 |
| ProteinID:CDY19626.1 | SEG:seg | UniParc:UPI0004EF244D | UniProt:A0A078G2T9 | MapMan:35.1 | : |
Description
BnaA05g20340DBnaA05g20340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2T9]
Coordinates
chrLK032098:+:657148..659177
Molecular Weight (calculated)
46322.6 Da
IEP (calculated)
9.341
GRAVY (calculated)
-0.473
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MILFSSTGGN MQVCCKRNPK FKVKTGPKTK FAPRRYGDLN IVYDVLQSFG SNYLAQVTID NDSPLGRLDR WNLTWEWMRG EIINTMRGAY THKRDPSECL
101: NSKAGQYYKD LDFSQVMNCQ KKQDISDLPP ERKEDNVTGK LPYCCKNGTL LPPIMDPWKA RSMFQLQVFK LPPDLNKTAL TLEDRWSSQS SVQMRATAVG
201: GSGRYSLASW QVVCNITKPK AQASRCCDTD TCNADCNPLL LPPDALLVPF KNRTLKAKAW AKQNHMPIPK KLPCPDNCGV SINWHVNTDY RDGWTARLTV
301: FNWRDFAFED WFVAVDMGKA GPGYENVYSF NGTRVPPNNR TVMFQGLPGL NYLVGQVNGT NPLRDPAVPG KQQSVISFTK KNIHGLNIPG GDGFPTKVFF
401: NGEELAFALM MG
101: NSKAGQYYKD LDFSQVMNCQ KKQDISDLPP ERKEDNVTGK LPYCCKNGTL LPPIMDPWKA RSMFQLQVFK LPPDLNKTAL TLEDRWSSQS SVQMRATAVG
201: GSGRYSLASW QVVCNITKPK AQASRCCDTD TCNADCNPLL LPPDALLVPF KNRTLKAKAW AKQNHMPIPK KLPCPDNCGV SINWHVNTDY RDGWTARLTV
301: FNWRDFAFED WFVAVDMGKA GPGYENVYSF NGTRVPPNNR TVMFQGLPGL NYLVGQVNGT NPLRDPAVPG KQQSVISFTK KNIHGLNIPG GDGFPTKVFF
401: NGEELAFALM MG
001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
Arabidopsis Description
COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.