Factsheet for Bra035768.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

nucleus 1
plasma membrane 2
mitochondrion 3
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19626	Canola	mitochondrion	77.89	71.84
PGSC0003DMT400002688	Potato	cytosol	18.68	55.04
Bra023941.1-P	Field mustard	plasma membrane	89.21	50.45
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	87.63	49.85
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	87.11	49.26
Bra020151.1-P	Field mustard	cytosol	28.42	41.7
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	65.0	37.83
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	65.53	37.56
VIT_19s0177g00160.t01	Wine grape	plasma membrane	61.05	35.42
PGSC0003DMT400002678	Potato	vacuole	61.32	35.25
VIT_10s0116g00620.t01	Wine grape	extracellular	59.74	34.71
GSMUA_Achr3P21560_001	Banana	plasma membrane	57.89	33.54
KRH22248	Soybean	golgi, vacuole	58.42	33.33
PGSC0003DMT400037398	Potato	vacuole	57.63	33.03
KRH27088	Soybean	mitochondrion	58.16	32.94
GSMUA_Achr4P33540_001	Banana	vacuole	57.37	32.78
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	52.89	32.68
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	57.63	32.64
Bra033528.1-P	Field mustard	plasma membrane	54.47	31.41
KXG36369	Sorghum	mitochondrion	55.26	31.2
Zm00001d021661_P001	Maize	mitochondrion	55.26	30.97
TraesCS7D01G136500.1	Wheat	mitochondrion	53.42	30.12
TraesCS7A01G136600.1	Wheat	mitochondrion	53.42	30.12
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	53.16	30.06
TraesCS7B01G037700.1	Wheat	mitochondrion	53.16	29.97
Os06t0685100-00	Rice	plasma membrane	52.63	29.28
Bra036147.1-P	Field mustard	plasma membrane	50.0	28.7
Bra021208.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	49.74	28.34
Bra035948.1-P	Field mustard	cytosol	6.05	23.71
Bra008684.1-P	Field mustard	extracellular	23.68	23.26
Bra023528.1-P	Field mustard	extracellular, plasma membrane, vacuole	25.26	22.12
Bra029346.1-P	Field mustard	cytosol, plasma membrane, plastid	7.11	21.95
Bra019992.1-P	Field mustard	cytosol	21.05	20.15
Bra030800.1-P	Field mustard	cytosol	21.84	19.9
Bra039163.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	23.16	19.34
Bra012996.1-P	Field mustard	plasma membrane	22.63	18.82
Bra025406.1-P	Field mustard	extracellular	21.58	18.81
Bra012993.1-P	Field mustard	endoplasmic reticulum, extracellular	10.0	18.45
Bra035951.1-P	Field mustard	plasma membrane	21.84	18.12
Bra040587.1-P	Field mustard	extracellular	20.53	17.77

Protein Annotations

EnsemblPlants:Bra035768.1	EnsemblPlants:Bra035768.1-P	EnsemblPlantsGene:Bra035768	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225
GO:GO:0040007	InterPro:COBRA_pln	PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	PFAM:PD140986	PFAM:PF04833
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002547AF2	UniProt:M4F3W8	MapMan:35.1	:

Description

AT3G20580 (E=2e-100) COBL10 | COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)

Coordinates

chrA05:+:17079654..17081127

Molecular Weight (calculated)

42356.1 Da

IEP (calculated)

8.733

GRAVY (calculated)

-0.350

Length

380 amino acids

Sequence
(BLAST)

001: MSVRIPMFSC SGMRGEIINT MRGAYTHKRD PSECLNSKAG QYYKDLDFSQ VMNCQKKPAI SDLPPERKDD NVTGKLPYCC KNGTILPPIM DPWKARSMFQ
101: LQVFKLPPDL NKTALCPPQY KCGPPVRIDP SSFPDSSGLP AITYAIASWQ VVCNITKPKA QASRCCDTDT CNAERNPLLL PPDALLVPFE NRTLQAKAWA
201: KQNHMPIPKE LPCPDNCGVS INWHVNTDYR DGWTARLTIF NWRDFAFEDW FVAVDMDKAG PGYENVYSFN STRVPPNNRT VMFQGLPGLN YLVGQVNGTN
301: PLRDPAVPGK QQSVISFTKK NIHGLNIPGG DGFPTKLFFN GEECALPKHF PKKSSGHRRG ISVLMSLVFA VAVAFALMMD

Best Arabidopsis Sequence Match ( AT3G16860.1 )
(BLAST)

001: MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT
101: NAVLSDGSSL PASVENGTIF AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ GSNVLQVCCT PNPNITTSKI
201: GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
301: LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV
401: VCNITQPTPP KCCVSFSSYF NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV PDPLPCGDNC GVSINWHLAT
501: DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
601: KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI

Arabidopsis Description

COBL8COBRA-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.