Factsheet for GSMUA_Achr3P21560_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P33540_001	Banana	vacuole	68.9	67.97
TraesCS7D01G136500.1	Wheat	mitochondrion	64.79	63.06
TraesCS7A01G136600.1	Wheat	mitochondrion	64.63	62.91
Zm00001d021661_P001	Maize	mitochondrion	64.94	62.83
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	64.02	62.5
VIT_10s0116g00620.t01	Wine grape	extracellular	62.2	62.39
KXG36369	Sorghum	mitochondrion	63.72	62.11
TraesCS7B01G037700.1	Wheat	mitochondrion	63.72	62.02
Os06t0685100-00	Rice	plasma membrane	64.48	61.93
VIT_19s0177g00160.t01	Wine grape	plasma membrane	61.28	61.37
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	33.54	57.89
CDY36030	Canola	vacuole	56.1	56.79
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	57.62	56.25
CDY19626	Canola	mitochondrion	35.21	56.07
Bra023941.1-P	Field mustard	plasma membrane	57.32	55.95
KRH27599	Soybean	extracellular	55.49	55.91
CDX82237	Canola	endoplasmic reticulum, vacuole	56.71	55.69
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	56.55	55.54
KRH77883	Soybean	extracellular, plasma membrane, vacuole	50.15	54.92
PGSC0003DMT400002678	Potato	vacuole	55.03	54.61
AT4G27110.1	Thale cress	extracellular	54.42	53.44
PGSC0003DMT400037398	Potato	vacuole	53.81	53.24
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	49.85	53.17
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	54.12	52.91
CDX89278	Canola	extracellular, golgi, vacuole	53.2	52.64
CDX97377	Canola	endoplasmic reticulum, golgi, vacuole	53.35	52.63
CDY29275	Canola	extracellular, plasma membrane, vacuole	53.35	52.63
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	52.13	52.37
KRH22248	Soybean	golgi, vacuole	52.9	52.1
PGSC0003DMT400002688	Potato	cytosol	10.21	51.94
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	52.29	51.73
CDY57659	Canola	cytosol	12.04	51.63
CDY14283	Canola	endoplasmic reticulum, plasma membrane, vacuole	53.66	51.54
KRH27088	Soybean	mitochondrion	52.59	51.42
PGSC0003DMT400005270	Potato	cytosol	54.57	50.0
GSMUA_Achr11P...	Banana	plasma membrane	50.46	48.96
GSMUA_AchrUn_...	Banana	plasma membrane	49.09	48.28
Solyc02g080250.1.1	Tomato	cytosol	25.0	47.95
CDY09102	Canola	cytosol	18.75	47.13
GSMUA_Achr8P10390_001	Banana	cytosol	17.84	46.8
Bra020151.1-P	Field mustard	cytosol	17.99	45.56
CDY55591	Canola	plasma membrane	56.1	44.23
CDY43072	Canola	plasma membrane	56.25	43.67
GSMUA_Achr1P24500_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	18.9	27.07
GSMUA_Achr2P06240_001	Banana	mitochondrion	19.66	27.04
GSMUA_Achr4P03210_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	17.99	26.4
GSMUA_Achr4P01440_001	Banana	extracellular, plasma membrane	18.29	26.26
GSMUA_Achr4P27070_001	Banana	cytosol	16.31	25.85
GSMUA_Achr4P14440_001	Banana	plasma membrane	17.99	25.76

Protein Annotations

EnsemblPlants:GSMUA_Achr3P21560_001	EnsemblPlants:GSMUA_Achr3T21560_001	EnsemblPlantsGene:GSMUA_Achr3G21560_001	GO:GO:0005575	GO:GO:0008150	GO:GO:0009987
GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0031225	GO:GO:0040007
InterPro:COBRA_pln	PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	PFAM:PD140986	PFAM:PF04833	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI000296EB2A	UniProt:M0SGM2	MapMan:21.1.2.2	:	:

Description

COBRA-like protein 10 [Source:GMGC_GENE;Acc:GSMUA_Achr3G21560_001]

Coordinates

chr3:+:22520188..22522251

Molecular Weight (calculated)

73520.3 Da

IEP (calculated)

8.072

GRAVY (calculated)

-0.265

Length

656 amino acids

Sequence
(BLAST)

001: MPLPRSLLLA VFFFSILVHV DVLAQDYDGE DEGYHPKSED SCNGVFLTYT FESRTKEFPH VKNASAQAYA FKSTATVLNA MTEDLKAWKI FIGFQHDEIL
101: VSASGAVIMD GTDYPAHVGN GTSLSGYPQA DLLNSIDTAG DMNQIMVTIQ MTGTQFGVKP PAVPMPKTIK LTNDGFDCPK PTRKDSHMFV CCVKNKKYKK
201: AKPTETRFLP RQHADLTIAY DVLQAYDSNY MAQVTIDNNS PLGRLDNWNL TWEWKRGEFI YSMKGAYTLR HDFSDCIYSE AAKYYKDLDF SPVMSCEKKP
301: IIVDLPPERA NDSQIGRLPY CCKNGTLLPP IMDISKSKAI FQMQVYKIEP DLNRTALYPP QNFKIVGFLN PQYKCGPPIR VSPMEFPDPS GLMSTSYAMA
401: SWQVACNITR PEARKSRCCV TFSAYYNDSV VPCSTCACGC PEEASCNPKA PAVLLPPEAL LIPAENRSAK ARAWAQIKHT SLPKRLPCWD TCGVSINWHI
501: MSNYRSGWTA RITLFNWRDY TFKNWFAAVR IPKAYKGYEN VYSFNGTKLS EINNTIFLQG LQYMNYLLPQ TEGKSPDDFK LPGKQQSVIS FKKKATPGIN
601: IMRGDGFPTR VFFDGEECAL PDTIPRAGDG HRPPVGVVPA LMAAVMVFAL LMDNLC

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.