CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plasma membrane 2
mitochondrion 5
vacuole 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22248	Soybean	golgi, vacuole	91.65	92.34
Bra035768.1-P	Field mustard	mitochondrion, peroxisome, plastid	32.94	58.16
CDY36030	Canola	vacuole	55.89	57.87
CDY19626	Canola	mitochondrion	35.32	57.52
VIT_19s0177g00160.t01	Wine grape	plasma membrane	55.44	56.79
CDX82237	Canola	endoplasmic reticulum, vacuole	56.33	56.59
Bra001795.1-P	Field mustard	endoplasmic reticulum, vacuole	56.18	56.44
Bra023941.1-P	Field mustard	plasma membrane	56.48	56.4
AT3G20580.1	Thale cress	endoplasmic reticulum, vacuole	56.33	56.25
CDX97377	Canola	endoplasmic reticulum, golgi, vacuole	55.14	55.64
PGSC0003DMT400002678	Potato	vacuole	54.69	55.52
CDX89278	Canola	extracellular, golgi, vacuole	54.55	55.2
Bra026378.1-P	Field mustard	extracellular, golgi, vacuole	53.65	55.13
Solyc07g064200.2.1	Tomato	extracellular, golgi, vacuole	50.37	54.96
CDY29275	Canola	extracellular, plasma membrane, vacuole	54.4	54.89
Bra010411.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	53.95	54.6
VIT_10s0116g00620.t01	Wine grape	extracellular	53.2	54.59
AT4G27110.1	Thale cress	extracellular	54.25	54.49
CDY14283	Canola	endoplasmic reticulum, plasma membrane, vacuole	55.14	54.17
KRH27599	Soybean	extracellular	52.31	53.92
GSMUA_Achr4P33540_001	Banana	vacuole	52.61	53.08
PGSC0003DMT400037398	Potato	vacuole	52.01	52.64
GSMUA_Achr3P21560_001	Banana	plasma membrane	51.42	52.59
KRH77883	Soybean	extracellular, plasma membrane, vacuole	46.94	52.59
Solyc10g006450.2.1	Tomato	golgi, plasma membrane, vacuole	51.56	51.56
CDY09102	Canola	cytosol	19.67	50.57
KXG36369	Sorghum	mitochondrion	50.07	49.93
KRH50776	Soybean	endoplasmic reticulum, vacuole	47.84	49.92
Zm00001d021661_P001	Maize	mitochondrion	49.93	49.41
KRH02312	Soybean	endoplasmic reticulum, extracellular	47.09	49.07
TraesCS7D01G136500.1	Wheat	mitochondrion	48.73	48.52
CDY57659	Canola	cytosol	11.03	48.37
HORVU7Hr1G028350.1	Barley	golgi, mitochondrion, plasma membrane	48.44	48.36
TraesCS7A01G136600.1	Wheat	mitochondrion	48.29	48.07
TraesCS7B01G037700.1	Wheat	mitochondrion	48.14	47.92
Os06t0685100-00	Rice	plasma membrane	48.73	47.88
Bra020151.1-P	Field mustard	cytosol	18.48	47.88
KRH37033	Soybean	extracellular	46.2	47.69
CDY55591	Canola	plasma membrane	56.04	45.19
CDY43072	Canola	plasma membrane	56.04	44.5
PGSC0003DMT400002688	Potato	cytosol	8.49	44.19
KRG93686	Soybean	extracellular, plasma membrane, vacuole	18.93	29.47
KRH01361	Soybean	extracellular, plasma membrane, vacuole	18.63	29.0
KRH45086	Soybean	plasma membrane	18.63	29.0
KRH01357	Soybean	nucleus	17.73	28.33
KRH63181	Soybean	endoplasmic reticulum	18.78	27.63
KRH18350	Soybean	cytosol	7.3	27.53
KRH72178	Soybean	mitochondrion	15.05	27.37
KRH01360	Soybean	extracellular, golgi, plasma membrane	18.18	27.23
KRH45084	Soybean	extracellular, golgi, plasma membrane	18.18	27.23
KRH54735	Soybean	endoplasmic reticulum	18.48	27.19
KRG93684	Soybean	extracellular, vacuole	18.18	26.87
KRH03165	Soybean	extracellular	18.18	26.87
KRH63180	Soybean	plasma membrane	18.03	26.42
KRH54737	Soybean	plasma membrane	18.03	26.42
KRH18352	Soybean	plasma membrane	18.03	26.42
KRH51434	Soybean	endoplasmic reticulum, plasma membrane, vacuole	17.29	26.07
KRH60734	Soybean	plasma membrane	17.14	25.73
KRH56778	Soybean	extracellular	7.0	22.49

Protein Annotations

EntrezGene:100789175	MapMan:21.1.2.2	EMBL:ACUP02007768	InterPro:COBRA_pln	EnsemblPlantsGene:GLYMA_12G213400	GO:GO:0005575
GO:GO:0008150	GO:GO:0009987	GO:GO:0010215	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0031225	GO:GO:0040007	UniProt:I1LUQ4	EnsemblPlants:KRH27088	ProteinID:KRH27088	ProteinID:KRH27088.1
PFAM:PD140986	PFAM:PF04833	PANTHER:PTHR31052	PANTHER:PTHR31052:SF2	UniParc:UPI0002962780	SEG:seg

Description

hypothetical protein

Coordinates

chr12:+:37233639..37237118

Molecular Weight (calculated)

74874.7 Da

IEP (calculated)

9.090

GRAVY (calculated)

-0.334

Length

671 amino acids

Sequence
(BLAST)

001: MVSTLLKQVR SSHPTKTITK VITTYLFLFL SFHVGHGQHD FEKFSSSLSS PPPPHMTELD ACNGVFLTYA LLGRVKEYPH VTNTSKQAWA FKAEASLTNV
101: GDEEVPGWKM FVGFQHREIL VSADGAVLID AGDFPAEVGN GTTLVGTATT DLKTAIDTAG DINQMSVRIQ MTGTQFGLGA GATPMPKTIR LENDGFKCPA
201: PSRRATRMFV CCKKDPKVKA KQAKKTKYPP RRKGDITIAY DVLQAFQNNY YAEVRIDNNH PLGRLDHWNL TWEWQKGEFI YSMKGAFARR KDPSECLYGL
301: AGKFYKDMDF SNVATCEKKP TISDLPSERK EDEKVGKLPW CCRNGTVLPP IMDKNKARSM FQMQVFKIAP DSDNRTALTP PTKWNIDGVI NPKYKCSAPV
401: RVDPQVFPDP SGLRAITTAV ASWQIVCNIT KPKPQENRCC VSFSAFYNES AIPCNTCACG CDDTRKCSSR ASPLLLPPDA LLVPFVNRTV KARAWAKLKH
501: LHVPSKLPCG DNCPVSINWH VSSDHKDGWT ARITLFNWEE YSFDDWFTAI QLKRTFEDFH DVYSFNGTRI PGLKTVFLEG LKGLNYLSGE TNGTHANDPR
601: VPGKQQSVLS FSKKHIKDFD VTHDGFPTKV FFNGMECSLP PIRPAKSSGH KSSSISVIAL IFTAFVTFLM I

Best Arabidopsis Sequence Match ( AT3G20580.1 )
(BLAST)

001: MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE
101: LKGWQMFIGF RHKELIVSAT GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM PRTIKLTNDG WECPAAKRKG
201: GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY
301: KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ
401: FPDPSGLLAV TYAISSWQVV CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP FDNRTLKAKA WAKQNHMPVP
501: KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP
601: GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV FATIAAFALM MD

Arabidopsis Description

COBL10COBRA-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJU0]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.